RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1249535" and tax_phylum = "Uroviricota"

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tax_superkingdom 1

tax_phylum 1

  • Uroviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1249535 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27484588 27484588 PRJNA1249535_S_NODE_81043_length_400_cov_1.314985_g77662_i0 PRJNA1249535 81043 400 1.314985 5.25994 Caudoviricetes sp. 2832643 Viruses Viruses 45.1 0.0219   NR DAR16837.1 2832643 g77662 i0 38.2 0.4125 55 34 41.3 0 205 369 52 106 DAR16837.1 MAG TPA: putative cytoplasmic protein [Caudoviricetes sp.] diamond 165 45.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
28621307 28621307 PRJNA1249535_S_NODE_170727_length_322_cov_5.477912_g167344_i0 PRJNA1249535 170727 322 5.477912 17.63887664 Citrobacter phage CkP1 2799684 Viruses Viruses 43.1 0.0341   NR QQG32173.1 2799684 g167344 i0 47.7 0.409937888198758 44 17 41 1 254 123 48 85 QQG32173.1 hypothetical protein CkP1_0011 [Citrobacter phage CkP1] diamond 132 43.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Pantevenvirales Straboviridae Karamvirus Citrobacter phage CkP1
30042046 30042046 PRJNA1249535_S_NODE_134711_length_345_cov_4.893382_g131328_i0 PRJNA1249535 134711 345 4.893382 16.8821679 Caudoviricetes sp. 2832643 Viruses Viruses 42.4 0.0132   NR DAE83087.1 2832643 g131328 i0 39.5 0.373913043478261 43 25 36.5 1 131 6 3 45 DAE83087.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 129 42.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;