contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA1249535" and tax_phylum = "Bacillariophyta"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27136545 | 27136545 | PRJNA1249535_S_NODE_315822_length_244_cov_4.426901_g312439_i0 | PRJNA1249535 | 315822 | 244 | 4.426901 | 10.80163844 | Seminavis robusta | 568900 | SAR_Eukaryotes | SAR_Eukaryotes | 44.7 | 0.00794 | NR | CAB9522350.1 | 568900 | g312439 | i0 | 33.8 | 0.799180327868853 | 65 | 38 | 79.9 | 1 | 29 | 223 | 188 | 247 | CAB9522350.1 expressed unknown protein [Seminavis robusta] | diamond | 195 | 44.7 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Naviculales | Naviculaceae | Seminavis | Seminavis robusta | ||
| 27313170 | 27313170 | PRJNA1249535_S_NODE_320283_length_242_cov_2.556213_g316900_i0 | PRJNA1249535 | 320283 | 242 | 2.556213 | 6.18603546 | root | 1 | Root_unresolved | Root_unresolved | 43.9 | 0.0142 | NR | WPV76434.1 | 2126271 | g316900 | i0 | 38.6 | 2.14462809917355 | 44 | 27 | 54.5 | 0 | 43 | 174 | 264 | 307 | WPV76434.1 RT-like putative protein [Naviculales sp.] | diamond | 519 | 43.9 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Naviculales | Naviculales sp. | ||||
| 27692215 | 27692215 | PRJNA1249535_S_NODE_266124_length_271_cov_3.232323_g262741_i0 | PRJNA1249535 | 266124 | 271 | 3.232323 | 8.75959533 | Bacillariophyta | 2836 | SAR_Eukaryotes | SAR_Eukaryotes | 43.9 | 0.0199 | NR | YP_010277180.1 | 33649 | g262741 | i0 | 60.6 | 1.46125461254613 | 33 | 13 | 36.5 | 0 | 254 | 156 | 326 | 358 | YP_010277180.1 Hsp70-type chaperone [Thalassionema nitzschioides] | diamond | 396 | 43.9 | 1 | Eukaryota | Sar | Bacillariophyta | Fragilariophyceae | Thalassionemales | Thalassionemataceae | Thalassionema | Thalassionema nitzschioides | ||
| 27989778 | 27989778 | PRJNA1249535_S_NODE_190785_length_311_cov_3.533613_g187402_i0 | PRJNA1249535 | 190785 | 311 | 3.533613 | 10.98953643 | Chaetoceros tenuissimus | 426638 | SAR_Eukaryotes | SAR_Eukaryotes | 43.9 | 0.0317 | NR | GFH54937.1 | 426638 | g187402 | i0 | 42.9 | 0.472668810289389 | 49 | 25 | 44.4 | 1 | 273 | 136 | 230 | 278 | GFH54937.1 hypothetical protein CTEN210_11413 [Chaetoceros tenuissimus] | diamond | 147 | 43.9 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Chaetocerotales | Chaetocerotaceae | Chaetoceros | Chaetoceros tenuissimus | ||
| 31766767 | 31766767 | PRJNA1249535_S_NODE_244337_length_283_cov_1.857143_g240954_i0 | PRJNA1249535 | 244337 | 283 | 1.857143 | 5.25571469 | root | 1 | Root_unresolved | Root_unresolved | 56.6 | 8.05e-7 | NR | KAL3781033.1 | 29204 | g240954 | i0 | 36.6 | 14.5017667844523 | 82 | 45 | 86.9 | 2 | 11 | 256 | 202 | 276 | KAL3781033.1 hypothetical protein HJC23_007929 [Cyclotella cryptica] | diamond | 4104 | 57 | 0.992982456140351 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Stephanodiscales | Stephanodiscaceae | Cyclotella | Cyclotella cryptica |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;