RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1249535" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 7 ✖

bioproject 1

  • PRJNA1249535 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27768938 27768938 PRJNA1249535_S_NODE_244544_length_283_cov_1.438095_g241161_i0 PRJNA1249535 244544 283 1.438095 4.06980885 brine shrimp arlivirus 8 2900383 Viruses Viruses 53.1 1.26e-5   NR UNI74120.1 2900383 g241161 i0 38.8 0.710247349823322 67 41 71 0 205 5 1 67 UNI74120.1 MAG: hypothetical protein [brine shrimp arlivirus 8] diamond 201 53.1 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsaeighalis
28115855 28115855 PRJNA1249535_S_NODE_184965_length_314_cov_5.029046_g181582_i0 PRJNA1249535 184965 314 5.029046 15.79120444 brine shrimp chuvirus 1 2900479 Viruses Viruses 43.5 0.0478   NR UIW13701.1 2900479 g181582 i0 48.9 0.429936305732484 45 19 43 1 3 137 770 810 UIW13701.1 MAG: RNA-dependent RNA polymerase [brine shrimp chuvirus 1] diamond 135 43.5 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae   brine shrimp chuvirus 1
30421655 30421655 PRJNA1249535_S_NODE_222833_length_294_cov_3.253394_g219450_i0 PRJNA1249535 222833 294 3.253394 9.56497836 Betacoronavirus 1 694003 Viruses Viruses 43.9 0.028   NR QTF66155.1 694003 g219450 i0 35.4 0.489795918367347 48 28 45.9 1 268 134 1165 1212 QTF66155.1 ORF1ab polyprotein [Betacoronavirus 1] diamond 144 43.9 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus gravedinis
31527631 31527631 PRJNA1249535_S_NODE_75816_length_408_cov_7.250746_g72435_i0 PRJNA1249535 75816 408 7.250746 29.58304368 brine shrimp arlivirus 8 2900383 Viruses Viruses 136 1.95e-35   NR UNI74120.1 2900383 g72435 i0 59.5 0.816176470588235 111 45 81.6 0 3 335 249 359 UNI74120.1 MAG: hypothetical protein [brine shrimp arlivirus 8] diamond 333 136 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsaeighalis
32065177 32065177 PRJNA1249535_S_NODE_254118_length_278_cov_1.273171_g250735_i0 PRJNA1249535 254118 278 1.273171 3.53941538 brine shrimp yue-like virus 8 2900460 Viruses Viruses 169 2.05e-46   NR UNI74191.1 2900460 g250735 i0 90.1 0.982014388489209 91 9 98.2 0 2 274 1197 1287 UNI74191.1 MAG: RNA-dependent RNA polymerase [brine shrimp yue-like virus 8] diamond 273 169 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 8
32602919 32602919 PRJNA1249535_S_NODE_11220_length_799_cov_9.249311_g8744_i0 PRJNA1249535 11220 799 9.249311 73.90199489 Xinjiang tick rhabdovirus 2560016 Viruses Viruses 91.3 7.5e-17   NR YP_010797955.1 2560016 g8744 i0 36.2 0.529411764705882 141 88 52.2 2 2 418 219 359 YP_010797955.1 NP [Xinjiang tick rhabdovirus] diamond 423 91.3 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Lostrhavirus Lostrhavirus hyalomma
32791667 32791667 PRJNA1249535_S_NODE_242560_length_284_cov_1.658768_g239177_i0 PRJNA1249535 242560 284 1.658768 4.71090112 brine shrimp yue-like virus 4 2900456 Viruses Viruses 117 1.27e-28   NR UNI74172.1 2900456 g239177 i0 61.2 0.897887323943662 85 33 89.8 0 30 284 240 324 UNI74172.1 MAG: hypothetical protein [brine shrimp yue-like virus 4] diamond 255 117 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;