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contig_metadata

10 rows where analysis = "diamond", bioproject = "PRJNA1249535" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 10 ✖

bioproject 1

  • PRJNA1249535 · 10 ✖

analysis 1

  • diamond · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27376492 27376492 PRJNA1249535_S_NODE_332083_length_232_cov_3.100629_g328700_i0 PRJNA1249535 332083 232 3.100629 7.19345928 Haloferax 2251 Archaea Archaea 42.4 0.0447   NR WP_004970558.1 35745 g328700 i0 33.3 2.68965517241379 69 32 71.1 1 168 4 242 310 WP_004970558.1 L-lactate permease [Haloferax denitrificans] diamond 624 42.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloferax Haloferax denitrificans
28115872 28115872 PRJNA1249535_S_NODE_211005_length_300_cov_4.207048_g207622_i0 PRJNA1249535 211005 300 4.207048 12.621144 Methanobrevibacter boviskoreani 1348249 Archaea Archaea 143 1.43e-38   NR WP_274952164.1 1348249 g207622 i0 71 1 100 29 100 0 1 300 60 159 WP_274952164.1 ATP-binding protein [Methanobrevibacter boviskoreani] diamond 300 143 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter boviskoreani
28778870 28778870 PRJNA1249535_S_NODE_101507_length_373_cov_4.330000_g98124_i0 PRJNA1249535 101507 373 4.33 16.1509 Candidatus Methanolliviera hydrocarbonicum 2491085 Archaea Archaea 45.4 0.0173   NR RZN68674.1 2491085 g98124 i0 29.5 0.764075067024129 95 56 73.2 3 318 46 362 449 RZN68674.1 MAG: acyl-CoA dehydrogenase [Candidatus Methanolliviera hydrocarbonicum] diamond 285 45.4 1 Archaea   Methanobacteriati Methanobacteriota Candidatus Methanoliparia Candidatus Methanoliparales Candidatus Methanollivieraceae Candidatus Methanolliviera Candidatus Methanolliviera hydrocarbonicum
29031841 29031841 PRJNA1249535_S_NODE_152148_length_334_cov_1.984674_g148765_i0 PRJNA1249535 152148 334 1.984674 6.62881116 Thermoplasmatota archaeon 2806419 Archaea Archaea 45.8 0.00914   NR MEE8565855.1 2806419 g148765 i0 50 0.323353293413174 36 17 32.3 1 301 194 1190 1224 MEE8565855.1 hypothetical protein [Thermoplasmatota archaeon] diamond 108 45.8 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
30105247 30105247 PRJNA1249535_S_NODE_290932_length_257_cov_11.391304_g287549_i0 PRJNA1249535 290932 257 11.391304 29.27565128 Halobacteriales archaeon SW_9_67_25 1919210 Archaea Archaea 41.2 0.0251   NR PSQ59589.1 1919210 g287549 i0 30.9 0.642023346303502 55 38 64.2 0 239 75 7 61 PSQ59589.1 MAG: hypothetical protein BRD23_04035 [Halobacteriales archaeon SW_9_67_25] diamond 165 41.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     Halobacteriales archaeon SW_9_67_25
30231731 30231731 PRJNA1249535_S_NODE_301852_length_252_cov_0.871508_g298469_i0 PRJNA1249535 301852 252 0.871508 2.19620016 Thermoplasmata archaeon 1906666 Archaea Archaea 42.7 0.00741   NR MCK5773661.1 1906666 g298469 i0 35.5 0.738095238095238 62 36 72.6 2 190 8 5 63 MCK5773661.1 50S ribosomal protein L37Ae [Thermoplasmata archaeon] diamond 186 42.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
30295297 30295297 PRJNA1249535_S_NODE_229192_length_291_cov_2.119266_g225809_i0 PRJNA1249535 229192 291 2.119266 6.16706406 Thermoplasmata archaeon 1906666 Archaea Archaea 43.1 0.031   NR UCF07645.1 1906666 g225809 i0 53.3 0.309278350515464 30 14 30.9 0 225 136 57 86 UCF07645.1 MAG: GTP-binding protein [Thermoplasmata archaeon] diamond 90 43.1 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
30421634 30421634 PRJNA1249535_S_NODE_168653_length_324_cov_1.322709_g165270_i0 PRJNA1249535 168653 324 1.322709 4.28557716 Methanosphaera sp. 2666342 Archaea Archaea 43.5 0.0466   NR MBQ6220651.1 2666342 g165270 i0 38.6 0.527777777777778 57 34 51.9 1 268 101 259 315 MBQ6220651.1 transposase [Methanosphaera sp.] diamond 171 43.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp.
30628608 30628608 PRJNA1249535_S_NODE_281433_length_263_cov_1.942105_g278050_i0 PRJNA1249535 281433 263 1.942105 5.10773615 Methanobacterium 2160 Archaea Archaea 43.9 0.0134   NR MBI4812854.1 2164 g278050 i0 26.2 2.08745247148289 61 44 68.4 1 21 200 81 141 MBI4812854.1 preprotein translocase subunit SecD [Methanobacterium sp.] diamond 549 43.9 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
32413452 32413452 PRJNA1249535_S_NODE_76179_length_408_cov_2.322388_g72798_i0 PRJNA1249535 76179 408 2.322388 9.47534304 uncultured Methanomethylovorans sp. 183759 Archaea Archaea 45.8 0.0169   NR WP_321416730.1 183759 g72798 i0 36.4 0.485294117647059 66 38 45.6 1 31 216 371 436 WP_321416730.1 RNA-guided endonuclease InsQ/TnpB family protein [uncultured Methanomethylovorans sp.] diamond 198 45.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanomethylovorans uncultured Methanomethylovorans sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;