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contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA1249042" and tax_phylum = "Streptophyta"

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tax_superkingdom 1

tax_phylum 1

  • Streptophyta · 24 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1249042 · 24 ✖

analysis 1

  • diamond · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14383446 14383446 PRJNA1249042_S_NODE_24772_length_252_cov_2.923445_g24558_i0 PRJNA1249042 24772 252 2.923445 7.3670814 Eukaryota 2759 Plants Plants 156 2.52e-46   NR KAJ8606111.1 3435 g24558 i0 88 9.86904761904762 83 10 98.8 0 2 250 104 186 KAJ8606111.1 hypothetical protein MRB53_041187 [Persea americana] diamond 2487 157 0.993630573248408 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Laurales Lauraceae Persea Persea americana
27344780 27344780 PRJNA1249042_S_NODE_105803_length_157_cov_2.052632_g105589_i0 PRJNA1249042 105803 157 2.052632 3.22263224 Magnoliopsida 3398 Plants Plants 41.6 0.0307   NR XP_026413298.1 3469 g105589 i0 48.7 2.23566878980892 39 19 74.5 1 19 135 439 476 XP_026413298.1 ferredoxin-dependent glutamate synthase, chloroplastic-like [Papaver somniferum] diamond 351 41.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ranunculales Papaveraceae Papaver Papaver somniferum
27547591 27547591 PRJNA1249042_S_NODE_8784_length_319_cov_3.065217_g8570_i0 PRJNA1249042 8784 319 3.065217 9.77804223 Ensete ventricosum 4639 Plants Plants 43.1 0.0148   NR RZR78371.1 4639 g8570 i0 47.7 0.413793103448276 44 23 41.4 0 165 296 6 49 RZR78371.1 hypothetical protein BHM03_00003660 [Ensete ventricosum] diamond 132 43.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Zingiberales Musaceae Ensete Ensete ventricosum
27674079 27674079 PRJNA1249042_S_NODE_68344_length_189_cov_1.931507_g68130_i0 PRJNA1249042 68344 189 1.931507 3.65054823 Canavalia gladiata 3824 Plants Plants 40.8 0.0174   NR KAK7339161.1 3824 g68130 i0 45 0.634920634920635 40 18 57.1 1 39 146 33 72 KAK7339161.1 hypothetical protein VNO77_19812 [Canavalia gladiata] diamond 120 40.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Canavalia Canavalia gladiata
28242043 28242043 PRJNA1249042_S_NODE_31226_length_239_cov_1.821429_g31012_i0 PRJNA1249042 31226 239 1.821429 4.35321531 Forsythia ovata 205694 Plants Plants 42 0.0397   NR KAL2548042.1 205694 g31012 i0 48.9 0.564853556485356 45 14 54 2 2 130 29 66 KAL2548042.1 Rapid ALkalinization Factor [Forsythia ovata] diamond 135 42 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Forsythia Forsythia ovata
28526585 28526585 PRJNA1249042_S_NODE_45427_length_216_cov_2.173410_g45213_i0 PRJNA1249042 45427 216 2.17341 4.6945656 Sesamum indicum 4182 Plants Plants 42 0.0483   NR XP_011078350.1 4182 g45213 i0 39.1 1.11111111111111 46 28 63.9 0 34 171 49 94 XP_011078350.1 trihelix transcription factor ASIL2 [Sesamum indicum] diamond 240 42 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Pedaliaceae Sesamum Sesamum indicum
28810201 28810201 PRJNA1249042_S_NODE_110668_length_154_cov_1.297297_g110454_i0 PRJNA1249042 110668 154 1.297297 1.99783738 Paulownia fortunei 586722 Plants Plants 47.8 1.45e-5   NR KAI3444993.1 586722 g110454 i0 84 0.487012987012987 25 4 48.7 0 144 70 38 62 KAI3444993.1 hypothetical protein Pfo_001658 [Paulownia fortunei] diamond 75 47.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Paulowniaceae Paulownia Paulownia fortunei
29189610 29189610 PRJNA1249042_S_NODE_59449_length_199_cov_0.903846_g59235_i0 PRJNA1249042 59449 199 0.903846 1.79865354 Oryza sativa 4530 Plants Plants 41.2 0.0181   NR KAB8110131.1 4530 g59235 i0 31.6 0.85929648241206 57 39 85.9 0 180 10 1 57 KAB8110131.1 hypothetical protein EE612_047063, partial [Oryza sativa] diamond 171 41.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
29410354 29410354 PRJNA1249042_S_NODE_13889_length_286_cov_3.238683_g13675_i0 PRJNA1249042 13889 286 3.238683 9.26263338 Solanum lycopersicum 4081 Plants Plants 47.4 3.31e-4   NR AYE66860.1 4081 g13675 i0 52 0.524475524475524 50 24 52.4 0 123 272 27 76 AYE66860.1 hypothetical protein, partial [Solanum lycopersicum] diamond 150 47.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum lycopersicum
29505087 29505087 PRJNA1249042_S_NODE_61690_length_196_cov_2.150327_g61476_i0 PRJNA1249042 61690 196 2.150327 4.21464092 Iris pallida 29817 Plants Plants 42.4 0.00559   NR KAJ6839550.1 29817 g61476 i0 36.8 0.872448979591837 57 36 87.2 0 20 190 9 65 KAJ6839550.1 DEAD-box ATP-dependent RNA helicase 50 [Iris pallida] diamond 171 42.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asparagales Iridaceae Iris Iris pallida
29568246 29568246 PRJNA1249042_S_NODE_19090_length_267_cov_2.098214_g18876_i0 PRJNA1249042 19090 267 2.098214 5.60223138 Olax retusa 3049601 Plants Plants 45.1 0.00632   NR WHU54996.1 3049601 g18876 i0 31.6 0.853932584269663 76 46 79.8 2 17 229 26 100 WHU54996.1 maturase K, partial [Olax retusa] diamond 228 45.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Santalales Olacaceae Olax Olax retusa
29631174 29631174 PRJNA1249042_S_NODE_11790_length_297_cov_1.846457_g11576_i0 PRJNA1249042 11790 297 1.846457 5.48397729 Brassica oleracea 3712 Plants Plants 46.2 0.0015   NR VDD33108.1 3712 g11576 i0 28.4 0.676767676767677 67 47 66.7 1 233 36 65 131 VDD33108.1 unnamed protein product [Brassica oleracea] diamond 201 46.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Brassica Brassica oleracea
29662665 29662665 PRJNA1249042_S_NODE_77290_length_180_cov_2.970803_g77076_i0 PRJNA1249042 77290 180 2.970803 5.3474454 Tanacetum cinerariifolium 118510 Plants Plants 41.6 0.0416   NR GEY37002.1 118510 g77076 i0 38.8 0.816666666666667 49 30 81.7 0 155 9 1299 1347 GEY37002.1 hypothetical protein [Tanacetum cinerariifolium] diamond 147 41.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Tanacetum Tanacetum cinerariifolium
29978876 29978876 PRJNA1249042_S_NODE_37171_length_228_cov_3.378378_g36957_i0 PRJNA1249042 37171 228 3.378378 7.70270184 Vicia villosa 3911 Plants Plants 43.9 0.0116   NR XP_058777183.1 3911 g36957 i0 35.8 2.11842105263158 53 27 69.7 2 62 220 351 396 XP_058777183.1 uncharacterized protein LOC131651517 [Vicia villosa] diamond 483 43.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Vicia Vicia villosa
30295222 30295222 PRJNA1249042_S_NODE_22192_length_258_cov_3.279070_g21978_i0 PRJNA1249042 22192 258 3.27907 8.4600006 Papaver nudicaule 74823 Plants Plants 43.5 0.0241   NR MCL7045203.1 74823 g21978 i0 59.3 0.313953488372093 27 11 31.4 0 111 31 351 377 MCL7045203.1 hypothetical protein [Papaver nudicaule] diamond 81 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ranunculales Papaveraceae Papaver Papaver nudicaule
30642222 30642222 PRJNA1249042_S_NODE_57433_length_201_cov_1.784810_g57219_i0 PRJNA1249042 57433 201 1.78481 3.5874681 Amborella trichopoda 13333 Plants Plants 41.6 0.016   NR KAL4193179.1 13333 g57219 i0 40 0.597014925373134 40 24 59.7 0 125 6 29 68 KAL4193179.1 hypothetical protein AMTRI_Chr06g175640 [Amborella trichopoda] diamond 120 41.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Amborellales Amborellaceae Amborella Amborella trichopoda
30863473 30863473 PRJNA1249042_S_NODE_71254_length_186_cov_1.979021_g71040_i0 PRJNA1249042 71254 186 1.979021 3.68097906 Buddleja alternifolia 168488 Plants Plants 40 0.0439   NR KAG8389312.1 168488 g71040 i0 72.7 0.354838709677419 22 6 35.5 0 184 119 72 93 KAG8389312.1 hypothetical protein BUALT_Bualt02G0216300 [Buddleja alternifolia] diamond 66 40 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Scrophulariaceae Buddleja Buddleja alternifolia
31116058 31116058 PRJNA1249042_S_NODE_51075_length_208_cov_4.563636_g50861_i0 PRJNA1249042 51075 208 4.563636 9.49236288 Carnegiea gigantea 171969 Plants Plants 92.8 2.0200000000000003e-21   NR KAJ8449012.1 171969 g50861 i0 65.2 7.58653846153846 66 23 95.2 0 206 9 130 195 KAJ8449012.1 hypothetical protein Cgig2_004067 [Carnegiea gigantea] diamond 1578 92.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Cactaceae Carnegiea Carnegiea gigantea
31369476 31369476 PRJNA1249042_S_NODE_77936_length_180_cov_1.372263_g77722_i0 PRJNA1249042 77936 180 1.372263 2.4700734 Tanacetum cinerariifolium 118510 Plants Plants 40.8 0.0372   NR GFB84751.1 118510 g77722 i0 45.7 0.583333333333333 35 19 58.3 0 151 47 6 40 GFB84751.1 hypothetical protein [Tanacetum cinerariifolium] diamond 105 40.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Tanacetum Tanacetum cinerariifolium
32286971 32286971 PRJNA1249042_S_NODE_37639_length_228_cov_1.010811_g37425_i0 PRJNA1249042 37639 228 1.010811 2.30464908 Rhynchospora pubera 906938 Plants Plants 44.3 0.00904   NR KAJ4768641.1 906938 g37425 i0 41.2 0.671052631578947 51 30 67.1 0 189 37 81 131 KAJ4768641.1 Heat shock 70 kDa protein [Rhynchospora pubera] diamond 153 44.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Cyperaceae Rhynchospora Rhynchospora pubera
32318606 32318606 PRJNA1249042_S_NODE_42619_length_220_cov_1.971751_g42405_i0 PRJNA1249042 42619 220 1.971751 4.3378522 Parasponia andersonii 3476 Plants Plants 60.5 3.24e-9   NR PON41366.1 3476 g42405 i0 90 0.409090909090909 30 3 40.9 0 1 90 137 166 PON41366.1 Pollen allergen Ole e 1 family [Parasponia andersonii] diamond 90 60.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Parasponia Parasponia andersonii
32413330 32413330 PRJNA1249042_S_NODE_34439_length_233_cov_2.226316_g34225_i0 PRJNA1249042 34439 233 2.226316 5.18731628 Bienertia sinuspersici 338654 Plants Plants 42 0.0208   NR KAL2930801.1 338654 g34225 i0 40.4 1.46781115879828 57 34 73.4 0 16 186 13 69 KAL2930801.1 polyprotein [Bienertia sinuspersici] diamond 342 42 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Chenopodiaceae Bienertia Bienertia sinuspersici
32413339 32413339 PRJNA1249042_S_NODE_83899_length_174_cov_2.564885_g83685_i0 PRJNA1249042 83899 174 2.564885 4.4628999 Fraxinus pennsylvanica 56036 Plants Plants 74.7 6.85e-14   NR CAI9781093.1 56036 g83685 i0 100 0.551724137931034 32 0 55.2 0 172 77 374 405 CAI9781093.1 unnamed protein product [Fraxinus pennsylvanica] diamond 96 74.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Fraxinus Fraxinus pennsylvanica
32445096 32445096 PRJNA1249042_S_NODE_62579_length_195_cov_2.164474_g62365_i0 PRJNA1249042 62579 195 2.164474 4.2207243 Cryptomeria japonica 3369 Plants Plants 47 6.27e-4   NR XP_059070522.1 3369 g62365 i0 55.8 0.661538461538462 43 19 66.2 0 63 191 815 857 XP_059070522.1 uncharacterized protein LOC131040138 [Cryptomeria japonica] diamond 129 47 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;