RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1249042" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1249042 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30358473 30358473 PRJNA1249042_S_NODE_56792_length_202_cov_0.886792_g56578_i0 PRJNA1249042 56792 202 0.886792 1.79131984 Adineta ricciae 249248 Rotifera other_Eukaryota 94 2.92e-22   NR CAF0938553.1 249248 g56578 i0 96.1 1.51485148514851 51 2 75.7 0 201 49 125 175 CAF0938553.1 unnamed protein product [Adineta ricciae] diamond 306 94 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
30421579 30421579 PRJNA1249042_S_NODE_35113_length_232_cov_1.878307_g34899_i0 PRJNA1249042 35113 232 1.878307 4.35767224 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 42 0.0107   NR CAF4740403.1 392030 g34899 i0 36 0.646551724137931 50 32 64.7 0 154 5 3 52 CAF4740403.1 unnamed protein product, partial [Rotaria magnacalcarata] diamond 150 42 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
31464357 31464357 PRJNA1249042_S_NODE_104936_length_158_cov_1.226087_g104722_i0 PRJNA1249042 104936 158 1.226087 1.93721746 Rotaria sp. Silwood1 2762511 Rotifera other_Eukaryota 40.8 0.0138   NR CAF3950424.1 2762511 g104722 i0 52.9 0.645569620253165 34 16 64.6 0 148 47 16 49 CAF3950424.1 unnamed protein product [Rotaria sp. Silwood1] diamond 102 40.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;