contig_metadata
4 rows where analysis = "diamond", bioproject = "PRJNA1249042" and tax_kingdom = "Pararnavirae"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27674071 | 27674071 | PRJNA1249042_S_NODE_104204_length_158_cov_2.286957_g103990_i0 | PRJNA1249042 | 104204 | 158 | 2.286957 | 3.61339206 | Gammaretrovirus murleu | 3428959 | Viruses | Viruses | 109 | 2.49e-26 | NR | 8WUS_E | 11801 | g103990 | i0 | 98.1 | 0.987341772151899 | 52 | 1 | 98.7 | 0 | 3 | 158 | 280 | 331 | 8WUS_E Chain E, Gag-Pol polyprotein [Moloney murine leukemia virus] | diamond | 156 | 109 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Gammaretrovirus | Gammaretrovirus murleu | ||
| 28684428 | 28684428 | PRJNA1249042_S_NODE_38127_length_227_cov_1.788043_g37913_i0 | PRJNA1249042 | 38127 | 227 | 1.788043 | 4.05885761 | Feline endogenous virus ECE1 | 11766 | Viruses | Viruses | 65.9 | 2.17e-10 | NR | P31792.1 | 11766 | g37913 | i0 | 44.7 | 2.00881057268722 | 76 | 37 | 93.8 | 1 | 4 | 216 | 205 | 280 | P31792.1 RecName: Full=Pol polyprotein; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [Feline endogenous virus ECE1] | diamond | 456 | 65.9 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Gammaretrovirus | Feline endogenous virus | ||
| 31116060 | 31116060 | PRJNA1249042_S_NODE_5295_length_380_cov_7.913947_g5081_i0 | PRJNA1249042 | 5295 | 380 | 7.913947 | 30.0729986 | Gammaretrovirus murleu | 3428959 | Viruses | Viruses | 262 | 2.45e-83 | NR | 8WUS_E | 11801 | g5081 | i0 | 100 | 8.81052631578947 | 124 | 0 | 97.9 | 0 | 3 | 374 | 141 | 264 | 8WUS_E Chain E, Gag-Pol polyprotein [Moloney murine leukemia virus] | diamond | 3348 | 262 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Gammaretrovirus | Gammaretrovirus murleu | ||
| 31577175 | 31577175 | PRJNA1249042_S_NODE_3596_length_466_cov_3.713948_g3385_i0 | PRJNA1249042 | 3596 | 466 | 3.713948 | 17.30699768 | Gammaretrovirus | 153135 | Viruses | Viruses | 295 | 2.41e-89 | NR | NP_057933.2 | 11801 | g3385 | i0 | 98.1 | 1.98283261802575 | 154 | 3 | 99.1 | 0 | 464 | 3 | 1174 | 1327 | NP_057933.2 Pr180 [Moloney murine leukemia virus] | diamond | 924 | 295 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Gammaretrovirus | Gammaretrovirus murleu |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;