RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1249042" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA1249042 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13108524 13108524 PRJNA1249042_S_NODE_62051_length_196_cov_1.228758_g61837_i0 PRJNA1249042 62051 196 1.228758 2.40836568 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 75.5 5.87e-14   NR AVM87439.1 3063761 g61837 i0 60.4 0.811224489795918 53 21 81.1 0 31 189 100 152 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 159 75.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
27358296 27358296 PRJNA1249042_S_NODE_102703_length_159_cov_2.525862_g102489_i0 PRJNA1249042 102703 159 2.525862 4.01612058 Trichoderma harzianum orthocurvulavirus 1 2846570 Viruses Viruses 40.8 0.0427   NR WGH72974.1 2846570 g102489 i0 40.6 0.60377358490566 32 19 60.4 0 22 117 124 155 WGH72974.1 MAG: hypothetical protein [Trichoderma harzianum orthocurvulavirus 1] diamond 96 40.8 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Curvulaviridae Orthocurvulavirus Orthocurvulavirus trichodermae
28336949 28336949 PRJNA1249042_S_NODE_16126_length_277_cov_2.611111_g15912_i0 PRJNA1249042 16126 277 2.611111 7.23277747 Diplodia seriata botourmiavirus 1 2932871 Viruses Viruses 102 4.159999999999999e-23   NR UOK20173.1 2932871 g15912 i0 63 0.790613718411552 73 27 79.1 0 4 222 223 295 UOK20173.1 RNA dependent RNA polymerase [Diplodia seriata botourmiavirus 1] diamond 219 102 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Diplodia seriata botourmiavirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;