RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1248471" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1248471 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29473301 29473301 PRJNA1248471_S_NODE_11170_length_199_cov_0.806667_g11070_i0 PRJNA1248471 11170 199 0.806667 1.60526733 Microphthalmus listensis 142807 Annelida Annelida 43.1 0.013   NR QHT64944.1 142807 g11070 i0 71.4 0.422110552763819 28 8 42.2 0 86 3 183 210 QHT64944.1 cytochrome oxidase subunit 2, partial [Microphthalmus listensis] diamond 84 43.1 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Hesionidae Microphthalmus Microphthalmus listensis
31401029 31401029 PRJNA1248471_S_NODE_3996_length_276_cov_0.757709_g3896_i0 PRJNA1248471 3996 276 0.757709 2.09127684 Capitella teleta 283909 Annelida Annelida 56.6 2.08e-8   NR ELU17866.1 283909 g3896 i0 64.6 0.521739130434783 48 8 52.2 1 72 215 1 39 ELU17866.1 hypothetical protein CAPTEDRAFT_109301, partial [Capitella teleta] diamond 144 56.6 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;