RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1248424" and tax_phylum = "Uroviricota"

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tax_superkingdom 1

tax_phylum 1

  • Uroviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1248424 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27263332 27263332 PRJNA1248424_P_NODE_27243_length_580_cov_2.266272_g21247_i0 PRJNA1248424 27243 580 2.266272 13.1443776 Caudoviricetes sp. 2832643 Viruses Viruses 48.1 0.0047   NR DAP98603.1 2832643 g21247 i0 45.5 0.227586206896552 44 24 22.8 0 555 424 128 171 DAP98603.1 MAG TPA: Protein CXorf40A-overexpressed LPS associated factor 1 [Caudoviricetes sp.] diamond 132 48.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
27358272 27358272 PRJNA1248424_P_NODE_75283_length_245_cov_1.552326_g69214_i0 PRJNA1248424 75283 245 1.552326 3.8031987 Caudoviricetes sp. 2832643 Viruses Viruses 118 6.42e-29   NR DAY30402.1 2832643 g69214 i0 73.4 0.96734693877551 79 21 96.7 0 1 237 442 520 DAY30402.1 MAG TPA: Large Terminase [Caudoviricetes sp.] diamond 237 118 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
30105137 30105137 PRJNA1248424_P_NODE_66532_length_258_cov_1.021622_g60463_i0 PRJNA1248424 66532 258 1.021622 2.63578476 uncultured Caudovirales phage 2100421 Viruses Viruses 166 3.94e-46   NR CAB4138424.1 2100421 g60463 i0 85.9 0.988372093023256 85 12 98.8 0 257 3 265 349 CAB4138424.1 hypothetical protein UFOVP331_35 [uncultured Caudovirales phage] diamond 255 166 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;