RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1248424" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1248424 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27326512 27326512 PRJNA1248424_P_NODE_3423_length_3237_cov_12.444690_g2572_i0 PRJNA1248424 3423 3237 12.44469 402.8346153 brine shrimp partitivirus 1 2900392 Viruses Viruses 536 9.359999999999997e-178   NR UNI73932.1 2900392 g2572 i0 59.7 0.833178869323448 432 168 40 1 2722 1427 1 426 UNI73932.1 MAG: coat protein [brine shrimp partitivirus 1] diamond 2697 536 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   brine shrimp partitivirus 1
29063238 29063238 PRJNA1248424_P_NODE_58008_length_281_cov_1.052885_g51940_i0 PRJNA1248424 58008 281 1.052885 2.95860685 Bemisia tabaci dicistro-like virus 1 2840019 Viruses Viruses 115 2.1900000000000003e-27   NR QWC36477.1 2840019 g51940 i0 88.1 0.629893238434164 59 7 63 0 261 85 823 881 QWC36477.1 ORF2, partial [Bemisia tabaci dicistro-like virus 1] diamond 177 115 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Bemisia tabaci dicistro-like virus 1
29536716 29536716 PRJNA1248424_P_NODE_46990_length_325_cov_1.035714_g40923_i0 PRJNA1248424 46990 325 1.035714 3.3660705 Cinnamomum chago deltapartitivirus 1 2765856 Viruses Viruses 182 5.88e-53   NR DAF42460.1 2765856 g40923 i0 73.1 2.99076923076923 108 29 99.7 0 325 2 327 434 DAF42460.1 TPA_exp: RNA-dependent RNA polymerase [Cinnamomum chago deltapartitivirus 1] diamond 972 182 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae Deltapartitivirus Cinnamomum chago deltapartitivirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;