RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1248424" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1248424 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27926438 27926438 PRJNA1248424_P_NODE_35265_length_425_cov_0.826705_g29209_i0 PRJNA1248424 35265 425 0.826705 3.51349625 Chlamydiota bacterium 2081524 Bacteria Bacteria 46.2 0.0164   NR MEI8300511.1 2081524 g29209 i0 38.4 0.515294117647059 73 42 50.8 2 10 225 306 376 MEI8300511.1 RHS repeat-associated core domain-containing protein [Chlamydiota bacterium] diamond 219 46.2 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
28968473 28968473 PRJNA1248424_P_NODE_56688_length_284_cov_1.364929_g50620_i0 PRJNA1248424 56688 284 1.364929 3.87639836 Chlamydiota bacterium 2081524 Bacteria Bacteria 58.2 1.18e-7   NR MBM3207924.1 2081524 g50620 i0 40.3 0.707746478873239 67 40 70.8 0 275 75 157 223 MBM3207924.1 hypothetical protein [Chlamydiota bacterium] diamond 201 58.2 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;