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contig_metadata

27 rows where analysis = "diamond", bioproject = "PRJNA1248424" and tax_clade = "PVC group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 27 ✖

bioproject 1

  • PRJNA1248424 · 27 ✖

analysis 1

  • diamond · 27 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1628120 1628120 PRJNA1248424_P_NODE_78322_length_243_cov_0.905882_g72253_i0 PRJNA1248424 78322 243 0.905882 2.20129326 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 119 2.6e-30   NR MBI3321489.1 2035772 g72253 i0 65.8 5.81481481481481 79 27 97.5 0 241 5 271 349 MBI3321489.1 RluA family pseudouridine synthase [Candidatus Omnitrophota bacterium] diamond 1413 119 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
8006509 8006509 PRJNA1248424_P_NODE_66707_length_257_cov_1.543478_g60638_i0 PRJNA1248424 66707 257 1.543478 3.96673846 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 156 3.2e-45   NR MBR1608823.1 2212473 g60638 i0 95.3 0.992217898832685 85 4 99.2 0 255 1 56 140 MBR1608823.1 translation elongation factor Ts [Kiritimatiellia bacterium] diamond 255 156 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
9281393 9281393 PRJNA1248424_P_NODE_69068_length_251_cov_0.865169_g62999_i0 PRJNA1248424 69068 251 0.865169 2.17157419 Pseudomonadati 3379134 Bacteria Bacteria 147 2.7399999999999993e-40   NR MEI8371296.1 2026780 g62999 i0 86.7 16.8645418326693 83 11 99.2 0 2 250 199 281 MEI8371296.1 BREX system ATP-binding protein BrxD [Planctomycetota bacterium] diamond 4233 147 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
10556911 10556911 PRJNA1248424_P_NODE_49109_length_314_cov_3.385892_g43041_i0 PRJNA1248424 49109 314 3.385892 10.63170088 uncultured Phycisphaerae bacterium 904963 Bacteria Bacteria 85.1 8.57e-17   NR CAA9415099.1 904963 g43041 i0 82.6 0.439490445859873 46 8 43.9 0 139 2 303 348 CAA9415099.1 MAG: hypothetical protein AVDCRST_MAG64-2550, partial [uncultured Phycisphaerae bacterium] diamond 138 85.1 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       uncultured Phycisphaerae bacterium
27010218 27010218 PRJNA1248424_P_NODE_49182_length_314_cov_1.448133_g43114_i0 PRJNA1248424 49182 314 1.448133 4.54713762 Candidatus Scalindua sp. 2268189 Bacteria Bacteria 47.4 0.00178   NR MCP4254340.1 2268189 g43114 i0 45.1 0.487261146496815 51 28 48.7 0 160 312 81 131 MCP4254340.1 hypothetical protein [Candidatus Scalindua sp.] diamond 153 47.4 1 Bacteria PVC group Pseudomonadati Planctomycetota Candidatus Brocadiia Candidatus Brocadiales Candidatus Scalinduaceae Candidatus Scalindua Candidatus Scalindua sp.
27042032 27042032 PRJNA1248424_P_NODE_80062_length_241_cov_0.916667_g73993_i0 PRJNA1248424 80062 241 0.916667 2.20916747 Gemmataceae bacterium 2052164 Bacteria Bacteria 58.2 1.3e-7   NR HEY7330165.1 2052164 g73993 i0 59.7 0.771784232365145 62 23 74.7 2 48 227 213 274 HEY7330165.1 S53 family peptidase [Gemmataceae bacterium] diamond 186 58.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
27199803 27199803 PRJNA1248424_P_NODE_62522_length_269_cov_1.020408_g56453_i0 PRJNA1248424 62522 269 1.020408 2.74489752 Blastopirellula marina 124 Bacteria Bacteria 43.1 0.0299   NR WP_146118743.1 124 g56453 i0 34 0.524163568773234 47 31 52.4 0 59 199 80 126 WP_146118743.1 hypothetical protein [Blastopirellula marina] diamond 141 43.1 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Blastopirellula Blastopirellula marina
27326533 27326533 PRJNA1248424_P_NODE_75703_length_245_cov_0.895349_g69634_i0 PRJNA1248424 75703 245 0.895349 2.19360505 Planctomycetota bacterium 2026780 Bacteria Bacteria 65.5 8.98e-11   NR RMG14392.1 2026780 g69634 i0 47.5 3.93061224489796 80 41 98 1 242 3 90 168 RMG14392.1 MAG: ATP-dependent Clp endopeptidase proteolytic subunit ClpP [Planctomycetota bacterium] diamond 963 65.5 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
27579092 27579092 PRJNA1248424_P_NODE_75824_length_245_cov_0.895349_g69755_i0 PRJNA1248424 75824 245 0.895349 2.19360505 Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_ 2035772 Bacteria Bacteria 43.9 0.0117   NR OGX39193.1 1801861 g69755 i0 32.8 0.783673469387755 64 39 78.4 1 38 229 91 150 OGX39193.1 MAG: hypothetical protein A3C53_04385 [Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_68_15] diamond 192 43.9 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_68_15
27705824 27705824 PRJNA1248424_P_NODE_8604_length_1953_cov_63.887766_g5524_i2 PRJNA1248424 8604 1953 63.887766 1247.72806998 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 97.8 3.83e-19   NR MFH0952965.1 2026799 g5524 i2 44.4 0.152073732718894 99 54 15.2 1 584 288 104 201 MFH0952965.1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP [Verrucomicrobiota bacterium] diamond 297 97.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27926438 27926438 PRJNA1248424_P_NODE_35265_length_425_cov_0.826705_g29209_i0 PRJNA1248424 35265 425 0.826705 3.51349625 Chlamydiota bacterium 2081524 Bacteria Bacteria 46.2 0.0164   NR MEI8300511.1 2081524 g29209 i0 38.4 0.515294117647059 73 42 50.8 2 10 225 306 376 MEI8300511.1 RHS repeat-associated core domain-containing protein [Chlamydiota bacterium] diamond 219 46.2 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
28336921 28336921 PRJNA1248424_P_NODE_70666_length_250_cov_0.870056_g64597_i0 PRJNA1248424 70666 250 0.870056 2.17514 Lentisphaerota bacterium 1932692 Bacteria Bacteria 100 1.39e-22   NR MBE6396826.1 1932692 g64597 i0 53 0.996 83 39 99.6 0 2 250 327 409 MBE6396826.1 alpha-L-rhamnosidase [Lentisphaerota bacterium] diamond 249 100 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
28968473 28968473 PRJNA1248424_P_NODE_56688_length_284_cov_1.364929_g50620_i0 PRJNA1248424 56688 284 1.364929 3.87639836 Chlamydiota bacterium 2081524 Bacteria Bacteria 58.2 1.18e-7   NR MBM3207924.1 2081524 g50620 i0 40.3 0.707746478873239 67 40 70.8 0 275 75 157 223 MBM3207924.1 hypothetical protein [Chlamydiota bacterium] diamond 201 58.2 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
28968477 28968477 PRJNA1248424_P_NODE_76908_length_244_cov_0.900585_g70839_i0 PRJNA1248424 76908 244 0.900585 2.1974274 Thermoguttaceae bacterium 2691551 Bacteria Bacteria 160 1.19e-45   NR MBS7338267.1 2691551 g70839 i0 93.8 0.983606557377049 80 5 98.4 0 3 242 185 264 MBS7338267.1 glycosyltransferase family 4 protein [Thermoguttaceae bacterium] diamond 240 160 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Thermoguttaceae   Thermoguttaceae bacterium
29049729 29049729 PRJNA1248424_P_NODE_53488_length_292_cov_3.762557_g47420_i0 PRJNA1248424 53488 292 3.762557 10.98666644 Humisphaera 2807511 Bacteria Bacteria 65.1 2.84e-11   NR HEX8914895.1 2807514 g47420 i0 68.9 2.42465753424658 45 14 46.2 0 135 1 3 47 HEX8914895.1 beta-ketoacyl synthase N-terminal-like domain-containing protein [Humisphaera sp.] diamond 708 65.1 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Tepidisphaerales Tepidisphaeraceae Humisphaera Humisphaera sp.
29347372 29347372 PRJNA1248424_P_NODE_63869_length_265_cov_1.276042_g57800_i0 PRJNA1248424 63869 265 1.276042 3.3815113 Phycisphaerales bacterium 2052180 Bacteria Bacteria 41.2 0.0213   NR MCG8405468.1 2052180 g57800 i0 34.6 0.588679245283019 52 34 58.9 0 62 217 8 59 MCG8405468.1 hypothetical protein [Phycisphaerales bacterium] diamond 156 41.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
29441755 29441755 PRJNA1248424_P_NODE_7750_length_2099_cov_77.375617_g5524_i0 PRJNA1248424 7750 2099 77.375617 1624.11420083 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 99.4 1.23e-19   NR MFH0952965.1 2026799 g5524 i0 44.4 0.141495950452596 99 54 14.1 1 1370 1666 104 201 MFH0952965.1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP [Verrucomicrobiota bacterium] diamond 297 99.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29820675 29820675 PRJNA1248424_P_NODE_51831_length_299_cov_6.606195_g45763_i0 PRJNA1248424 51831 299 6.606195 19.75252305 Tepidisphaeraceae bacterium 2876886 Bacteria Bacteria 80.5 3.99e-15   NR HZN67648.1 2876886 g45763 i0 67.9 0.561872909698997 56 18 56.2 0 299 132 364 419 HZN67648.1 lamin tail domain-containing protein [Tepidisphaeraceae bacterium] diamond 168 80.5 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Tepidisphaerales Tepidisphaeraceae   Tepidisphaeraceae bacterium
30453022 30453022 PRJNA1248424_P_NODE_60253_length_275_cov_1.252475_g54185_i0 PRJNA1248424 60253 275 1.252475 3.44430625 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 86.3 1.53e-18   NR MFH0952965.1 2026799 g54185 i0 44 1.97454545454545 91 50 99.3 1 273 1 107 196 MFH0952965.1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP [Verrucomicrobiota bacterium] diamond 543 86.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31053354 31053354 PRJNA1248424_P_NODE_50255_length_308_cov_1.297872_g44187_i0 PRJNA1248424 50255 308 1.297872 3.99744576 Candidatus Uabimicrobium amorphum 2596890 Bacteria Bacteria 62 4.31e-9   NR WP_151970811.1 2596890 g44187 i0 42.6 2.12337662337662 68 38 66.2 1 304 101 128 194 WP_151970811.1 ATP-dependent Clp protease proteolytic subunit [Candidatus Uabimicrobium amorphum] diamond 654 62 1 Bacteria PVC group Pseudomonadati Planctomycetota Candidatus Uabimicrobiia Candidatus Uabimicrobiales Candidatus Uabimicrobiaceae Candidatus Uabimicrobium Candidatus Uabimicrobium amorphum
31071278 31071278 PRJNA1248424_P_NODE_63155_length_267_cov_1.237113_g57086_i0 PRJNA1248424 63155 267 1.237113 3.30309171 Bacteria 2 Bacteria Bacteria 43.1 0.0363   NR MBC7818314.1 2026779 g57086 i0 33.3 2.42696629213483 72 42 74.2 2 70 267 155 226 MBC7818314.1 DUF1501 domain-containing protein [Planctomycetaceae bacterium] diamond 648 43.5 0.990804597701149 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
31703558 31703558 PRJNA1248424_P_NODE_74777_length_246_cov_0.890173_g68708_i0 PRJNA1248424 74777 246 0.890173 2.18982558 Planctomycetia 203683 Bacteria Bacteria 95.5 2.16e-21   NR WP_213495257.1 1123043 g68708 i0 73.8 3.19512195121951 65 17 79.3 0 195 1 234 298 WP_213495257.1 aminotransferase class IV [Telmatocola sphagniphila] diamond 786 95.9 0.995828988529718 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae Telmatocola Telmatocola sphagniphila
31812051 31812051 PRJNA1248424_P_NODE_70717_length_250_cov_0.870056_g64648_i0 PRJNA1248424 70717 250 0.870056 2.17514 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 43.1 0.0173   NR MEM9016560.1 2026799 g64648 i0 41.8 0.66 55 29 62.4 2 76 231 60 114 MEM9016560.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 165 43.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31843503 31843503 PRJNA1248424_P_NODE_68557_length_252_cov_1.167598_g62488_i0 PRJNA1248424 68557 252 1.167598 2.94234696 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 43.1 0.0283   NR KAB2642523.1 2026799 g62488 i0 44.1 0.702380952380952 59 33 70.2 0 2 178 64 122 KAB2642523.1 MAG: ankyrin repeat domain-containing protein [Verrucomicrobiota bacterium] diamond 177 43.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31843505 31843505 PRJNA1248424_P_NODE_71977_length_248_cov_1.994286_g65908_i0 PRJNA1248424 71977 248 1.994286 4.94582928 Planctomycetia bacterium 2052181 Bacteria Bacteria 147 6.949999999999998e-42   NR MCA1685320.1 2052181 g65908 i0 82.9 0.991935483870968 82 14 99.2 0 2 247 92 173 MCA1685320.1 prolyl oligopeptidase family serine peptidase [Planctomycetia bacterium] diamond 246 147 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia       Planctomycetia bacterium
32160223 32160223 PRJNA1248424_P_NODE_66738_length_257_cov_1.434783_g60669_i0 PRJNA1248424 66738 257 1.434783 3.68739231 Thermoguttaceae bacterium 2691551 Bacteria Bacteria 55.8 4.4e-7   NR MBR0236662.1 2691551 g60669 i0 42 3.78210116731517 81 46 94.6 1 255 13 104 183 MBR0236662.1 ATP-dependent Clp protease proteolytic subunit [Thermoguttaceae bacterium] diamond 972 55.8 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Thermoguttaceae   Thermoguttaceae bacterium
32255330 32255330 PRJNA1248424_P_NODE_66378_length_258_cov_1.432432_g60309_i0 PRJNA1248424 66378 258 1.432432 3.69567456 Gemmataceae bacterium 2052164 Bacteria Bacteria 134 2.86e-35   NR HJT75664.1 2052164 g60309 i0 76.5 1.97674418604651 85 20 98.8 0 257 3 34 118 HJT75664.1 hypothetical protein [Gemmataceae bacterium] diamond 510 134 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;