RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1248424" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA1248424 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27389865 27389865 PRJNA1248424_P_NODE_59143_length_278_cov_1.151220_g53075_i0 PRJNA1248424 59143 278 1.15122 3.2003916 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 43.1 0.0428   NR KAJ3433941.1 1746091 g53075 i0 32.8 1.31654676258993 61 41 65.8 0 13 195 1189 1249 KAJ3433941.1 antigen bsp [Anaeramoeba flamelloides] diamond 366 43.1 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
27800309 27800309 PRJNA1248424_P_NODE_47964_length_321_cov_1.854839_g41897_i0 PRJNA1248424 47964 321 1.854839 5.95403319 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 82 1.35e-17   NR KAJ4453711.1 342808 g41897 i0 56.7 1.92523364485981 67 26 62.6 1 3 203 2 65 KAJ4453711.1 putative 60S acidic ribosomal protein P1 [Paratrimastix pyriformis] diamond 618 82 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;