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contig_metadata

31 rows where analysis = "diamond", bioproject = "PRJNA1245487" and tax_phylum = "Streptophyta"

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tax_superkingdom 1

tax_phylum 1

  • Streptophyta · 31 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1245487 · 31 ✖

analysis 1

  • diamond · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2901878 2901878 PRJNA1245487_P_NODE_14003_length_305_cov_1.982759_g13665_i0 PRJNA1245487 14003 305 1.982759 6.04741495 Rosales 3744 Plants Plants 158 1.87e-44   NR GMN27810.1 3494 g13665 i0 70.3 2.98032786885246 101 30 99.3 0 3 305 145 245 GMN27810.1 hypothetical protein TIFTF001_001808 [Ficus carica] diamond 909 158 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Moraceae Ficus Ficus carica
14380179 14380179 PRJNA1245487_P_NODE_13612_length_311_cov_1.546218_g13274_i0 PRJNA1245487 13612 311 1.546218 4.80873798 Eukaryota 2759 Plants Plants 147 1.81e-42   NR KFK34882.1 50452 g13274 i0 71.4 40.967845659164 98 28 94.5 0 15 308 50 147 KFK34882.1 hypothetical protein AALP_AA5G205700 [Arabis alpina] diamond 12741 148 0.993243243243243 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabis Arabis alpina
20752626 20752626 PRJNA1245487_P_NODE_19917_length_250_cov_0.881356_g19579_i0 PRJNA1245487 19917 250 0.881356 2.20339 Oryza 4527 Plants Plants 149 2.47e-41   NR XP_052167948.1 4538 g19579 i0 86.7 1.992 83 11 99.6 0 250 2 72 154 XP_052167948.1 uncharacterized mitochondrial protein AtMg00810-like [Oryza glaberrima] diamond 498 149 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza glaberrima
20752657 20752657 PRJNA1245487_P_NODE_22077_length_242_cov_0.923077_g21739_i0 PRJNA1245487 22077 242 0.923077 2.23384634 Ficus carica 3494 Plants Plants 114 2.7699999999999993e-28   NR GMN49480.1 3494 g21739 i0 75.3 0.954545454545455 77 19 95.5 0 12 242 6 82 GMN49480.1 hypothetical protein TIFTF001_018651 [Ficus carica] diamond 231 114 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Moraceae Ficus Ficus carica
27199771 27199771 PRJNA1245487_P_NODE_21422_length_244_cov_0.912281_g21084_i0 PRJNA1245487 21422 244 0.912281 2.22596564 Paspalum notatum var. saurae 547442 Plants Plants 65.1 5.09e-10   NR WVZ82507.1 547442 g21084 i0 59.1 1.62295081967213 66 24 81.1 1 198 1 439 501 WVZ82507.1 hypothetical protein U9M48_029761 [Paspalum notatum var. saurae] diamond 396 65.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Paspalum Paspalum notatum
27294839 27294839 PRJNA1245487_P_NODE_19483_length_251_cov_2.207865_g19145_i0 PRJNA1245487 19483 251 2.207865 5.54174115 Heracleum sosnowskyi 360622 Plants Plants 45.8 0.00329   NR KAK1350634.1 360622 g19145 i0 34.2 1.97211155378486 79 52 94.4 0 14 250 324 402 KAK1350634.1 putative polyamine transporter [Heracleum sosnowskyi] diamond 495 45.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Apiales Apiaceae Heracleum Heracleum sosnowskyi
27294842 27294842 PRJNA1245487_P_NODE_22383_length_237_cov_3.097561_g22045_i0 PRJNA1245487 22383 237 3.097561 7.34121957 Ricinus communis 3988 Plants Plants 65.1 4.27e-10   NR XP_002525129.2 3988 g22045 i0 56.1 1.44303797468354 57 24 72.2 1 6 176 258 313 XP_002525129.2 phospholipase A1-IIgamma [Ricinus communis] diamond 342 65.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Euphorbiaceae Ricinus Ricinus communis
27597334 27597334 PRJNA1245487_P_NODE_13084_length_319_cov_1.268293_g12746_i0 PRJNA1245487 13084 319 1.268293 4.04585467 Magnoliopsida 3398 Plants Plants 43.5 0.00616   NR KAH1115588.1 47602 g12746 i0 40.3 1.82445141065831 67 33 56.4 3 52 231 4 70 KAH1115588.1 hypothetical protein J1N35_008966 [Gossypium stocksii] diamond 582 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Malvaceae Gossypium Gossypium stocksii
27674004 27674004 PRJNA1245487_P_NODE_16844_length_272_cov_2.356784_g16506_i0 PRJNA1245487 16844 272 2.356784 6.41045248 Corchorus capsularis 210143 Plants Plants 119 9.82e-30   NR OMO52971.1 210143 g16506 i0 56.7 0.992647058823529 90 39 99.3 0 270 1 291 380 OMO52971.1 Glycoside hydrolase, family 28 [Corchorus capsularis] diamond 270 119 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Malvaceae Corchorus Corchorus capsularis
27692198 27692198 PRJNA1245487_P_NODE_20124_length_249_cov_0.886364_g19786_i0 PRJNA1245487 20124 249 0.886364 2.20704636 Rosales 3744 Plants Plants 84.3 6.04e-17   NR PON45333.1 63057 g19786 i0 78 0.987951807228916 41 9 49.4 0 1 123 341 381 PON45333.1 Fatty acid desaturase [Trema orientale] diamond 246 84.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Trema Trema orientale
27894735 27894735 PRJNA1245487_P_NODE_16805_length_273_cov_1.170000_g16467_i0 PRJNA1245487 16805 273 1.17 3.1941 Morus notabilis 981085 Plants Plants 130 5.44e-33   NR XP_010095116.1 981085 g16467 i0 76.9 1 91 20 98.9 1 3 272 54 144 XP_010095116.1 subtilisin-like protease SBT5.6 [Morus notabilis] diamond 273 130 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Moraceae Morus Morus notabilis
27894736 27894736 PRJNA1245487_P_NODE_17065_length_270_cov_1.928934_g16727_i0 PRJNA1245487 17065 270 1.928934 5.2081218 Lycium barbarum 112863 Plants Plants 80.5 3.82e-16   NR XP_060184185.1 112863 g16727 i0 47.8 7 90 47 100 0 270 1 132 221 XP_060184185.1 large ribosomal subunit protein eL6-like [Lycium barbarum] diamond 1890 80.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Lycium Lycium barbarum
28273596 28273596 PRJNA1245487_P_NODE_20186_length_249_cov_0.886364_g19848_i0 PRJNA1245487 20186 249 0.886364 2.20704636 Triticum aestivum 4565 Plants Plants 94.4 2.79e-20   NR SPT16664.1 4565 g19848 i0 60.2 2 83 32 98.8 1 2 247 218 300 SPT16664.1 unnamed protein product [Triticum aestivum] diamond 498 94.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
28481291 28481291 PRJNA1245487_P_NODE_19806_length_250_cov_1.389831_g19468_i0 PRJNA1245487 19806 250 1.389831 3.4745775 Magnoliopsida 3398 Plants Plants 51.6 2.97e-5   NR KAL4588937.1 333970 g19468 i0 63.2 1.452 38 14 45.6 0 248 135 646 683 KAL4588937.1 hypothetical protein LXL04_001837 [Taraxacum kok-saghyz] diamond 363 51.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Taraxacum Taraxacum kok-saghyz
28860038 28860038 PRJNA1245487_P_NODE_10608_length_364_cov_1.429553_g10270_i0 PRJNA1245487 10608 364 1.429553 5.20357292 Magnoliopsida 3398 Plants Plants 59.3 1.39e-7   NR XP_030926858.1 97700 g10270 i0 48.6 3.81593406593407 70 33 55.2 2 37 237 184 253 XP_030926858.1 alpha carbonic anhydrase 7-like [Quercus lobata] diamond 1389 59.7 0.993299832495812 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Quercus Quercus lobata
28873570 28873570 PRJNA1245487_P_NODE_8948_length_405_cov_2.493976_g8610_i0 PRJNA1245487 8948 405 2.493976 10.1006028 Hordeum vulgare subsp. vulgare 112509 Plants Plants 133 3.96e-36   NR BAJ99030.1 112509 g8610 i0 61.6 0.925925925925926 125 45 90.4 1 404 39 94 218 BAJ99030.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 375 133 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
28904948 28904948 PRJNA1245487_P_NODE_18908_length_254_cov_1.607735_g18570_i0 PRJNA1245487 18908 254 1.607735 4.0836469 Parasponia andersonii 3476 Plants Plants 74.7 2.29e-13   NR PON46871.1 3476 g18570 i0 75 1.68897637795276 48 12 56.7 0 253 110 460 507 PON46871.1 Multi antimicrobial extrusion protein [Parasponia andersonii] diamond 429 74.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Parasponia Parasponia andersonii
29018356 29018356 PRJNA1245487_P_NODE_18728_length_256_cov_1.021858_g18390_i0 PRJNA1245487 18728 256 1.021858 2.61595648 Rosales 3744 Plants Plants 63.9 6.09e-10   NR POO02458.1 63057 g18390 i0 60 1.453125 40 16 46.9 0 4 123 170 209 POO02458.1 Ves allergen [Trema orientale] diamond 372 64.3 0.993779160186625 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Trema Trema orientale
29063209 29063209 PRJNA1245487_P_NODE_21148_length_245_cov_0.906977_g20810_i0 PRJNA1245487 21148 245 0.906977 2.22209365 Triticum aestivum 4565 Plants Plants 51.2 2.52e-5   NR XBJ15085.1 4565 g20810 i0 66.7 0.477551020408163 39 13 47.8 0 129 245 1 39 XBJ15085.1 hypothetical protein VPH35_007054 [Triticum aestivum] diamond 117 51.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
29252297 29252297 PRJNA1245487_P_NODE_8729_length_411_cov_2.195266_g8391_i0 PRJNA1245487 8729 411 2.195266 9.02254326 Ficus carica 3494 Plants Plants 169 5.3899999999999997e-48   NR GMN27810.1 3494 g8391 i0 66.1 0.883211678832117 121 40 87.6 1 360 1 1 121 GMN27810.1 hypothetical protein TIFTF001_001808 [Ficus carica] diamond 363 169 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Moraceae Ficus Ficus carica
29491565 29491565 PRJNA1245487_P_NODE_20210_length_249_cov_0.886364_g19872_i0 PRJNA1245487 20210 249 0.886364 2.20704636 root 1 Root_unresolved Root_unresolved 92.4 1.9300000000000003e-21   NR XP_010519319.2 28532 g19872 i0 65.7 232.33734939759 70 24 84.3 0 249 40 67 136 XP_010519319.2 PREDICTED: LOW QUALITY PROTEIN: histone H3.2 [Tarenaya hassleriana] diamond 57852 92.8 0.995689655172414 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Cleomaceae Tarenaya Tarenaya hassleriana
30231556 30231556 PRJNA1245487_P_NODE_20372_length_248_cov_0.891429_g20034_i0 PRJNA1245487 20372 248 0.891429 2.21074392 Hordeum vulgare 4513 Plants Plants 70.5 6.77e-12   NR KAE8784660.1 4513 g20034 i0 50.8 0.762096774193548 63 31 76.2 0 218 30 693 755 KAE8784660.1 hypothetical protein D1007_41653 [Hordeum vulgare] diamond 189 70.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
30565268 30565268 PRJNA1245487_P_NODE_16673_length_274_cov_1.552239_g16335_i0 PRJNA1245487 16673 274 1.552239 4.25313486 Rosales 3744 Plants Plants 149 5.109999999999999e-40   NR PON52540.1 63057 g16335 i0 81.3 2.97810218978102 91 17 99.6 0 2 274 95 185 PON52540.1 Pectinesterase inhibitor domain containing protein [Trema orientale] diamond 816 149 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Trema Trema orientale
30944877 30944877 PRJNA1245487_P_NODE_20134_length_249_cov_0.886364_g19796_i0 PRJNA1245487 20134 249 0.886364 2.20704636 Rosales 3744 Plants Plants 134 1.33e-35   NR XP_062077230.1 3486 g19796 i0 73.2 1.97590361445783 82 22 98.8 0 3 248 53 134 XP_062077230.1 GDSL esterase/lipase At5g55050-like [Humulus lupulus] diamond 492 135 0.992592592592593 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Humulus Humulus lupulus
30958384 30958384 PRJNA1245487_P_NODE_16574_length_275_cov_1.514851_g16236_i0 PRJNA1245487 16574 275 1.514851 4.16584025 Paspalum notatum var. saurae 547442 Plants Plants 70.9 7.13e-12   NR WVZ51461.1 547442 g16236 i0 60.9 1.41818181818182 64 20 67.6 3 201 16 220 280 WVZ51461.1 hypothetical protein U9M48_002607 [Paspalum notatum var. saurae] diamond 390 70.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Paspalum Paspalum notatum
30958385 30958385 PRJNA1245487_P_NODE_17454_length_267_cov_1.324742_g17116_i0 PRJNA1245487 17454 267 1.324742 3.53706114 Oldenlandia corymbosa var. corymbosa 529605 Plants Plants 125 1.23e-34   NR CAI9098670.1 529605 g17116 i0 69.3 1.98876404494382 88 27 98.9 0 3 266 48 135 CAI9098670.1 OLC1v1035355C1 [Oldenlandia corymbosa var. corymbosa] diamond 531 125 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Gentianales Rubiaceae Oldenlandia Oldenlandia corymbosa
31577162 31577162 PRJNA1245487_P_NODE_16596_length_275_cov_1.148515_g16258_i0 PRJNA1245487 16596 275 1.148515 3.15841625 Magnoliopsida 3398 Plants Plants 65.5 5.36e-10   NR NP_001312801.1 4097 g16258 i0 60.9 14.52 46 18 50.2 0 274 137 444 489 NP_001312801.1 betaine aldehyde dehydrogenase, chloroplastic-like [Nicotiana tabacum] diamond 3993 65.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Nicotiana Nicotiana tabacum
32114971 32114971 PRJNA1245487_P_NODE_17898_length_263_cov_1.642105_g17560_i0 PRJNA1245487 17898 263 1.642105 4.31873615 Magnoliopsida 3398 Plants Plants 60.1 1.18e-9   NR PIA31717.1 218851 g17560 i0 47.7 2.29277566539924 65 33 74.1 1 203 9 3 66 PIA31717.1 hypothetical protein AQUCO_04900183v1 [Aquilegia coerulea] diamond 603 60.5 0.993388429752066 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ranunculales Ranunculaceae Aquilegia Aquilegia coerulea
32350043 32350043 PRJNA1245487_P_NODE_20379_length_248_cov_0.891429_g20041_i0 PRJNA1245487 20379 248 0.891429 2.21074392 Camelina sativa 90675 Plants Plants 49.7 8.82e-5   NR XP_019094303.1 90675 g20041 i0 41.4 2.10483870967742 58 32 70.2 1 72 245 106 161 XP_019094303.1 PREDICTED: nuclear speckle RNA-binding protein B-like isoform X3 [Camelina sativa] diamond 522 49.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Camelina Camelina sativa
32809714 32809714 PRJNA1245487_P_NODE_6760_length_477_cov_1.653465_g6424_i0 PRJNA1245487 6760 477 1.653465 7.88702805 Lamiales 4143 Plants Plants 144 1.92e-39   NR GER34224.1 4170 g6424 i0 57.7 5.13836477987421 137 55 84.9 2 407 3 54 189 GER34224.1 60S ribosomal protein L6, partial [Striga asiatica] diamond 2451 145 0.993103448275862 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Orobanchaceae Striga Striga asiatica
32854615 32854615 PRJNA1245487_P_NODE_21660_length_243_cov_1.200000_g21322_i0 PRJNA1245487 21660 243 1.2 2.916 Corchorus capsularis 210143 Plants Plants 74.7 1.64e-13   NR OMO52971.1 210143 g21322 i0 53.2 2.92592592592593 62 29 76.5 0 242 57 318 379 OMO52971.1 Glycoside hydrolase, family 28 [Corchorus capsularis] diamond 711 74.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Malvaceae Corchorus Corchorus capsularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;