RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1245487" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1245487 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26693657 26693657 PRJNA1245487_P_NODE_20921_length_246_cov_0.901734_g20583_i0 PRJNA1245487 20921 246 0.901734 2.21826564 Nematostella vectensis 45351 Cnidaria other_Eukaryota 68.2 4.3e-11   NR XP_048586642.1 45351 g20583 i0 53.1 6.46341463414634 64 30 78 0 246 55 409 472 XP_048586642.1 phospholipase B-like 1 [Nematostella vectensis] diamond 1590 68.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis
27136359 27136359 PRJNA1245487_P_NODE_14222_length_302_cov_2.026201_g13884_i0 PRJNA1245487 14222 302 2.026201 6.11912702 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 45.1 0.0122   NR XP_028518026.1 2652724 g13884 i0 55.6 2.28476821192053 45 20 44.7 0 301 167 11071 11115 XP_028518026.1 uncharacterized protein LOC110249207 [Exaiptasia diaphana] diamond 690 45.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana
32791527 32791527 PRJNA1245487_P_NODE_19640_length_251_cov_0.876404_g19302_i0 PRJNA1245487 19640 251 0.876404 2.19977404 Hydra vulgaris 6087 Cnidaria other_Eukaryota 83.6 1.71e-16   NR XP_065670751.1 6087 g19302 i0 50.6 4.70916334661355 79 38 94.4 1 239 3 300 377 XP_065670751.1 digestive cysteine proteinase 1 [Hydra vulgaris] diamond 1182 83.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;