contig_metadata
15 rows where analysis = "diamond", bioproject = "PRJNA1245487" and tax_phylum = "Bacteroidota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5454586 | 5454586 | PRJNA1245487_P_NODE_19885_length_250_cov_0.881356_g19547_i0 | PRJNA1245487 | 19885 | 250 | 0.881356 | 2.20339 | Cloacibacterium rupense | 517423 | Bacteria | Bacteria | 121 | 1.6100000000000002e-33 | NR | WP_188616684.1 | 517423 | g19547 | i0 | 95.2 | 0.744 | 62 | 3 | 74.4 | 0 | 188 | 3 | 1 | 62 | WP_188616684.1 hypothetical protein [Cloacibacterium rupense] | diamond | 186 | 121 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Cloacibacterium | Cloacibacterium rupense | |
| 6728905 | 6728905 | PRJNA1245487_P_NODE_17686_length_265_cov_1.401042_g17348_i0 | PRJNA1245487 | 17686 | 265 | 1.401042 | 3.7127613 | Chishuiella changwenlii | 1434701 | Bacteria | Bacteria | 157 | 3.38e-46 | NR | WP_072932230.1 | 1434701 | g17348 | i0 | 89.7 | 0.984905660377358 | 87 | 9 | 98.5 | 0 | 3 | 263 | 4 | 90 | WP_072932230.1 CBS domain-containing protein [Chishuiella changwenlii] | diamond | 261 | 157 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chishuiella | Chishuiella changwenlii | |
| 8704204 | 8704204 | PRJNA1245487_P_NODE_20467_length_248_cov_0.891429_g20129_i0 | PRJNA1245487 | 20467 | 248 | 0.891429 | 2.21074392 | Flavobacteriaceae bacterium | 1871037 | Bacteria | Bacteria | 124 | 2.79e-32 | NR | MDP2058583.1 | 1871037 | g20129 | i0 | 78 | 1.98387096774194 | 82 | 17 | 99.2 | 1 | 246 | 1 | 160 | 240 | MDP2058583.1 HAD-IC family P-type ATPase [Flavobacteriaceae bacterium] | diamond | 492 | 124 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacteriaceae bacterium | ||
| 15654023 | 15654023 | PRJNA1245487_P_NODE_11553_length_345_cov_2.518382_g11215_i0 | PRJNA1245487 | 11553 | 345 | 2.518382 | 8.6884179 | Flavobacteriaceae bacterium | 1871037 | Bacteria | Bacteria | 122 | 4.09e-32 | NR | MDP2061423.1 | 1871037 | g11215 | i0 | 68.1 | 0.817391304347826 | 94 | 30 | 81.7 | 0 | 5 | 286 | 126 | 219 | MDP2061423.1 30S ribosomal protein S8e [Flavobacteriaceae bacterium] | diamond | 282 | 122 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacteriaceae bacterium | ||
| 16928312 | 16928312 | PRJNA1245487_P_NODE_18554_length_257_cov_1.695652_g18216_i0 | PRJNA1245487 | 18554 | 257 | 1.695652 | 4.35782564 | Cytophagaceae bacterium | 2026729 | Bacteria | Bacteria | 60.5 | 2.45e-8 | NR | RYY11016.1 | 2026729 | g18216 | i0 | 82.1 | 0.653696498054475 | 56 | 3 | 57.2 | 4 | 111 | 257 | 1 | 56 | RYY11016.1 MAG: hypothetical protein EOO36_19650, partial [Cytophagaceae bacterium] | diamond | 168 | 60.5 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Cytophagaceae | Cytophagaceae bacterium | ||
| 22728236 | 22728236 | PRJNA1245487_P_NODE_20478_length_248_cov_0.891429_g20140_i0 | PRJNA1245487 | 20478 | 248 | 0.891429 | 2.21074392 | Segetibacter | 460073 | Bacteria | Bacteria | 156 | 1.57e-42 | NR | WP_018615018.1 | 398037 | g20140 | i0 | 98.7 | 2.83064516129032 | 78 | 1 | 94.4 | 0 | 234 | 1 | 1 | 78 | WP_018615018.1 molecular chaperone DnaK [Segetibacter koreensis] | diamond | 702 | 156 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Segetibacter | Segetibacter koreensis | |
| 27263319 | 27263319 | PRJNA1245487_P_NODE_21743_length_243_cov_0.917647_g21405_i0 | PRJNA1245487 | 21743 | 243 | 0.917647 | 2.22988221 | Chitinophagaceae bacterium | 1869212 | Bacteria | Bacteria | 133 | 1.08e-35 | NR | MCU0404716.1 | 1869212 | g21405 | i0 | 76.3 | 8.88888888888889 | 80 | 19 | 98.8 | 0 | 2 | 241 | 192 | 271 | MCU0404716.1 quinolinate synthase NadA [Chitinophagaceae bacterium] | diamond | 2160 | 133 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Chitinophagaceae bacterium | ||
| 27515951 | 27515951 | PRJNA1245487_P_NODE_16983_length_271_cov_1.535354_g16645_i0 | PRJNA1245487 | 16983 | 271 | 1.535354 | 4.16080934 | Capnocytophaga gingivalis | 1017 | Bacteria | Bacteria | 173 | 3.83e-51 | NR | WP_314306210.1 | 1017 | g16645 | i0 | 94.4 | 0.985239852398524 | 89 | 5 | 98.5 | 0 | 3 | 269 | 169 | 257 | WP_314306210.1 DUF445 domain-containing protein [Capnocytophaga gingivalis] | diamond | 267 | 173 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Capnocytophaga | Capnocytophaga gingivalis | |
| 28526509 | 28526509 | PRJNA1245487_P_NODE_20727_length_247_cov_0.896552_g20389_i0 | PRJNA1245487 | 20727 | 247 | 0.896552 | 2.21448344 | Bacteroidota bacterium | 1898104 | Bacteria | Bacteria | 115 | 1.18e-27 | NR | RKV83888.1 | 1898104 | g20389 | i0 | 96.6 | 0.716599190283401 | 59 | 2 | 71.7 | 0 | 177 | 1 | 449 | 507 | RKV83888.1 MAG: internalin, partial [Bacteroidota bacterium] | diamond | 177 | 115 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium | |||||
| 28904950 | 28904950 | PRJNA1245487_P_NODE_4768_length_575_cov_1.203187_g4435_i0 | PRJNA1245487 | 4768 | 575 | 1.203187 | 6.91832525 | Flectobacillus sp. BAB-3569 | 1509483 | Bacteria | Bacteria | 112 | 1.1500000000000002e-27 | NR | WP_095166595.1 | 1509483 | g4435 | i0 | 88.8 | 0.79304347826087 | 152 | 11 | 76.2 | 1 | 53 | 490 | 1 | 152 | WP_095166595.1 hypothetical protein [Flectobacillus sp. BAB-3569] | diamond | 456 | 112 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Flectobacillaceae | Flectobacillus | Flectobacillus sp. BAB-3569 | |
| 28968438 | 28968438 | PRJNA1245487_P_NODE_15468_length_287_cov_1.378505_g15130_i0 | PRJNA1245487 | 15468 | 287 | 1.378505 | 3.95630935 | Saprospiraceae bacterium | 2202734 | Bacteria | Bacteria | 91.3 | 5.42e-20 | NR | MBK8621143.1 | 2202734 | g15130 | i0 | 59.5 | 12.4808362369338 | 74 | 22 | 69 | 1 | 3 | 200 | 166 | 239 | MBK8621143.1 30S ribosomal protein S3 [Saprospiraceae bacterium] | diamond | 3582 | 91.3 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Saprospiria | Saprospirales | Saprospiraceae | Saprospiraceae bacterium | ||
| 29270425 | 29270425 | PRJNA1245487_P_NODE_13529_length_312_cov_1.774059_g13191_i0 | PRJNA1245487 | 13529 | 312 | 1.774059 | 5.53506408 | Chryseobacterium | 59732 | Bacteria | Bacteria | 190 | 3.66e-60 | NR | WP_294202073.1 | 259322 | g13191 | i0 | 93.6 | 4.51923076923077 | 94 | 6 | 90.4 | 0 | 2 | 283 | 49 | 142 | WP_294202073.1 hypothetical protein [uncultured Chryseobacterium sp.] | diamond | 1410 | 190 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | uncultured Chryseobacterium sp. | |
| 29820635 | 29820635 | PRJNA1245487_P_NODE_13731_length_309_cov_2.262712_g13393_i0 | PRJNA1245487 | 13731 | 309 | 2.262712 | 6.99178008 | Bacteroidia bacterium | 2044936 | Bacteria | Bacteria | 55.8 | 2.11e-6 | NR | MBJ7427349.1 | 2044936 | g13393 | i0 | 45.1 | 0.883495145631068 | 91 | 44 | 87.4 | 2 | 32 | 301 | 1689 | 1774 | MBJ7427349.1 cadherin-like beta sandwich domain-containing protein [Bacteroidia bacterium] | diamond | 273 | 55.8 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidia bacterium | ||||
| 31021491 | 31021491 | PRJNA1245487_P_NODE_22075_length_242_cov_0.923077_g21737_i0 | PRJNA1245487 | 22075 | 242 | 0.923077 | 2.23384634 | Emticicia agri | 2492393 | Bacteria | Bacteria | 152 | 6.94e-41 | NR | WP_229239424.1 | 2492393 | g21737 | i0 | 96.3 | 1.98347107438017 | 80 | 3 | 99.2 | 0 | 2 | 241 | 109 | 188 | WP_229239424.1 TonB-dependent receptor [Emticicia agri] | diamond | 480 | 152 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Leadbetterellaceae | Emticicia | Emticicia agri | |
| 31134032 | 31134032 | PRJNA1245487_P_NODE_20095_length_249_cov_1.238636_g19757_i0 | PRJNA1245487 | 20095 | 249 | 1.238636 | 3.08420364 | Emticicia | 312278 | Bacteria | Bacteria | 68.9 | 2.4e-11 | NR | WP_340236287.1 | 2027878 | g19757 | i0 | 41.6 | 3.7710843373494 | 77 | 45 | 92.8 | 0 | 235 | 5 | 806 | 882 | WP_340236287.1 penicillin-binding transpeptidase domain-containing protein [Emticicia soli] | diamond | 939 | 68.9 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Leadbetterellaceae | Emticicia | Emticicia soli |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;