RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1245487" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1245487 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4178370 4178370 PRJNA1245487_P_NODE_21344_length_244_cov_1.754386_g21006_i0 PRJNA1245487 21344 244 1.754386 4.28070184 Blastocatellia bacterium 2052146 Bacteria Bacteria 133 6.02e-34   NR HET9530953.1 2052146 g21006 i0 72.2 5.76639344262295 79 22 97.1 0 1 237 813 891 HET9530953.1 PIG-L family deacetylase [Blastocatellia bacterium] diamond 1407 133 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
29662591 29662591 PRJNA1245487_P_NODE_15470_length_287_cov_1.308411_g15132_i0 PRJNA1245487 15470 287 1.308411 3.75513957 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 75.9 1.23e-13   NR MEO8679489.1 2910147 g15132 i0 47.3 0.773519163763066 74 36 77.4 1 231 10 32 102 MEO8679489.1 thrombospondin type-1 domain-containing protein [Vicinamibacterales bacterium] diamond 222 75.9 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
29662595 29662595 PRJNA1245487_P_NODE_21470_length_244_cov_0.912281_g21132_i0 PRJNA1245487 21470 244 0.912281 2.22596564 Acidobacteriota bacterium 1978231 Bacteria Bacteria 80.9 8.08e-17   NR PYS87729.1 1978231 g21132 i0 58.7 0.922131147540984 75 31 92.2 0 242 18 111 185 PYS87729.1 MAG: hypothetical protein DMF62_11470 [Acidobacteriota bacterium] diamond 225 80.9 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31228901 31228901 PRJNA1245487_P_NODE_20475_length_248_cov_0.891429_g20137_i0 PRJNA1245487 20475 248 0.891429 2.21074392 Bacteria 2 Bacteria Bacteria 98.2 1.2300000000000002e-21   NR MBK6587192.1 1978231 g20137 i0 67.9 1.88709677419355 78 23 91.9 1 230 3 875 952 MBK6587192.1 LamG domain-containing protein [Acidobacteriota bacterium] diamond 468 98.2 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31292283 31292283 PRJNA1245487_P_NODE_22035_length_242_cov_0.923077_g21697_i0 PRJNA1245487 22035 242 0.923077 2.23384634 Bacteria 2 Bacteria Bacteria 152 1.04e-40   NR MEP7149289.1 1978231 g21697 i0 93.8 1.98347107438017 80 5 99.2 0 242 3 102 181 MEP7149289.1 efflux RND transporter permease subunit [Acidobacteriota bacterium] diamond 480 152 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31938366 31938366 PRJNA1245487_P_NODE_19957_length_250_cov_0.881356_g19619_i0 PRJNA1245487 19957 250 0.881356 2.20339 Candidatus Angelobacter sp. 2976921 Bacteria Bacteria 56.2 5.39e-7   NR HXA27752.1 2976921 g19619 i0 47.2 1.692 53 28 63.6 0 161 3 4 56 HXA27752.1 thioesterase family protein [Candidatus Angelobacter sp.] diamond 423 56.2 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia     Candidatus Angelobacter Candidatus Angelobacter sp.
32413258 32413258 PRJNA1245487_P_NODE_15819_length_283_cov_1.485714_g15481_i0 PRJNA1245487 15819 283 1.485714 4.20457062 Acidobacteriota bacterium 1978231 Bacteria Bacteria 74.3 4.2e-13   NR MEW6732442.1 1978231 g15481 i0 63 0.975265017667845 92 29 93.3 2 9 272 208 298 MEW6732442.1 hypothetical protein [Acidobacteriota bacterium] diamond 276 74.3 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;