contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA1242190" and tax_phylum = "Acidobacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26915369 | 26915369 | PRJNA1242190_S_NODE_9702_length_277_cov_1.147059_g9695_i0 | PRJNA1242190 | 9702 | 277 | 1.147059 | 3.17735343 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 53.5 | 6.6e-6 | NR | HEX8176079.1 | 2283092 | g9695 | i0 | 47.1 | 2.35018050541516 | 70 | 30 | 70.4 | 4 | 226 | 32 | 162 | 229 | HEX8176079.1 CAP domain-containing protein [Pyrinomonadaceae bacterium] | diamond | 651 | 53.5 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 29441697 | 29441697 | PRJNA1242190_S_NODE_11050_length_260_cov_2.283422_g11043_i0 | PRJNA1242190 | 11050 | 260 | 2.283422 | 5.9368972 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 50.1 | 1.95e-5 | NR | MDQ7008653.1 | 1978231 | g11043 | i0 | 62.9 | 0.773076923076923 | 35 | 13 | 40.4 | 0 | 250 | 146 | 75 | 109 | MDQ7008653.1 NFYB/HAP3 family transcription factor subunit [Acidobacteriota bacterium] | diamond | 201 | 50.1 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 30547510 | 30547510 | PRJNA1242190_S_NODE_5153_length_361_cov_4.201389_g5146_i0 | PRJNA1242190 | 5153 | 361 | 4.201389 | 15.16701429 | Acidobacteriaceae bacterium | 2052142 | Bacteria | Bacteria | 66.2 | 6.33e-10 | NR | MDR3737318.1 | 2052142 | g5146 | i0 | 42.9 | 0.814404432132964 | 98 | 53 | 78.9 | 2 | 355 | 71 | 211 | 308 | MDR3737318.1 hypothetical protein [Acidobacteriaceae bacterium] | diamond | 294 | 66.2 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Acidobacteriaceae bacterium | |||
| 31084665 | 31084665 | PRJNA1242190_S_NODE_5275_length_358_cov_1.943860_g5268_i0 | PRJNA1242190 | 5275 | 358 | 1.94386 | 6.9590188 | Terriglobales bacterium | 2282142 | Bacteria | Bacteria | 71.2 | 2.63e-12 | NR | HME33021.1 | 2282142 | g5268 | i0 | 40.2 | 0.770949720670391 | 92 | 55 | 77.1 | 0 | 350 | 75 | 99 | 190 | HME33021.1 hypothetical protein [Terriglobales bacterium] | diamond | 276 | 71.2 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Terriglobales bacterium | ||||
| 32223355 | 32223355 | PRJNA1242190_S_NODE_1178_length_576_cov_3.514911_g1171_i0 | PRJNA1242190 | 1178 | 576 | 3.514911 | 20.24588736 | Acidobacteriaceae bacterium | 2052142 | Bacteria | Bacteria | 147 | 1.42e-39 | NR | MDR3737318.1 | 2052142 | g1171 | i0 | 46 | 0.90625 | 174 | 90 | 89.6 | 3 | 557 | 42 | 141 | 312 | MDR3737318.1 hypothetical protein [Acidobacteriaceae bacterium] | diamond | 522 | 147 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Acidobacteriaceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;