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contig_metadata

32 rows where analysis = "diamond", bioproject = "PRJNA1242190" and tax_kingdom = "Bacillati"

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tax_superkingdom 1

tax_kingdom 1

  • Bacillati · 32 ✖

bioproject 1

  • PRJNA1242190 · 32 ✖

analysis 1

  • diamond · 32 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1625551 1625551 PRJNA1242190_S_NODE_11462_length_256_cov_1.278689_g11455_i0 PRJNA1242190 11462 256 1.278689 3.27344384 Microbacteriaceae 85023 Bacteria Bacteria 140 5.159999999999999e-38   NR WP_019619877.1 272240 g11455 i0 81 1.95703125 84 16 98.4 0 254 3 95 178 WP_019619877.1 NAD(P)/FAD-dependent oxidoreductase [Gulosibacter faecalis] diamond 501 140 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Gulosibacter Gulosibacter faecalis
5454427 5454427 PRJNA1242190_S_NODE_8725_length_290_cov_1.649770_g8718_i0 PRJNA1242190 8725 290 1.64977 4.784333 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 179 1.2399999999999998e-55   NR MBX9724270.1 2364082 g8718 i0 90.6 0.993103448275862 96 9 99.3 0 289 2 14 109 MBX9724270.1 50S ribosomal protein L15e [Candidatus Obscuribacterales bacterium] diamond 288 179 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
8004240 8004240 PRJNA1242190_S_NODE_7047_length_318_cov_1.669388_g7040_i0 PRJNA1242190 7047 318 1.669388 5.30865384 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 122 1.09e-32   NR MBX9724270.1 2364082 g7040 i0 98.3 0.547169811320755 58 1 54.7 0 2 175 113 170 MBX9724270.1 50S ribosomal protein L15e [Candidatus Obscuribacterales bacterium] diamond 174 122 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
16928074 16928074 PRJNA1242190_S_NODE_12354_length_250_cov_0.881356_g12347_i0 PRJNA1242190 12354 250 0.881356 2.20339 Actinomycetes 1760 Bacteria Bacteria 155 1.8199999999999998e-43   NR WP_314146458.1 340359 g12347 i0 92.5 2.916 80 6 96 0 9 248 236 315 WP_314146458.1 extracellular solute-binding protein [uncultured Leifsonia sp.] diamond 729 155 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leifsonia uncultured Leifsonia sp.
18202583 18202583 PRJNA1242190_S_NODE_13575_length_243_cov_0.905882_g13568_i0 PRJNA1242190 13575 243 0.905882 2.20129326 Leifsonia virtsii 3035915 Bacteria Bacteria 157 8.23e-43   NR WP_301217483.1 3035915 g13568 i0 95 0.987654320987654 80 4 98.8 0 241 2 264 343 WP_301217483.1 beta-galactosidase [Leifsonia virtsii] diamond 240 157 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leifsonia Leifsonia virtsii
19476966 19476966 PRJNA1242190_S_NODE_13696_length_242_cov_0.923077_g13689_i0 PRJNA1242190 13696 242 0.923077 2.23384634 Leifsonia sp. ku-ls 2220072 Bacteria Bacteria 124 2.2e-31   NR RDV45069.1 2220072 g13689 i0 81.3 0.991735537190083 80 15 99.2 0 2 241 177 256 RDV45069.1 MFS transporter [Leifsonia sp. ku-ls] diamond 240 124 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leifsonia Leifsonia sp. ku-ls
22027593 22027593 PRJNA1242190_S_NODE_11838_length_253_cov_0.866667_g11831_i0 PRJNA1242190 11838 253 0.866667 2.19266751 Leifsonia aquatica 144185 Bacteria Bacteria 157 1.4199999999999999e-42   NR WP_246397638.1 144185 g11831 i0 92.9 0.99604743083004 84 6 99.6 0 1 252 426 509 WP_246397638.1 heavy metal translocating P-type ATPase [Leifsonia aquatica] diamond 252 157 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leifsonia Leifsonia aquatica
24577274 24577274 PRJNA1242190_S_NODE_9020_length_286_cov_1.098592_g9013_i0 PRJNA1242190 9020 286 1.098592 3.14197312 Leifsonia sp. NPDC 1870902 Bacteria Bacteria 164 9.4e-50   NR WP_363806965.1 3155539 g9013 i0 86.8 0.954545454545455 91 12 95.5 0 274 2 1 91 WP_363806965.1 GNAT family N-acetyltransferase [Leifsonia sp. NPDC077715] diamond 273 164 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leifsonia Leifsonia sp. NPDC077715
24577284 24577284 PRJNA1242190_S_NODE_9600_length_278_cov_1.278049_g9593_i0 PRJNA1242190 9600 278 1.278049 3.55297622 Leifsonia 110932 Bacteria Bacteria 151 1.53e-41   NR RDV44404.1 2220072 g9593 i0 85.9 2.97841726618705 92 13 99.3 0 278 3 121 212 RDV44404.1 hypothetical protein DOE76_13585 [Leifsonia sp. ku-ls] diamond 828 151 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leifsonia Leifsonia sp. ku-ls
26598460 26598460 PRJNA1242190_S_NODE_13381_length_244_cov_0.912281_g13374_i0 PRJNA1242190 13381 244 0.912281 2.22596564 Leifsonia sp. ku-ls 2220072 Bacteria Bacteria 145 3.759999999999999e-42   NR RDV45641.1 2220072 g13374 i0 88.6 2.87704918032787 79 9 97.1 0 8 244 1 79 RDV45641.1 N-acetyltransferase [Leifsonia sp. ku-ls] diamond 702 145 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leifsonia Leifsonia sp. ku-ls
26915368 26915368 PRJNA1242190_S_NODE_6642_length_326_cov_2.086957_g6635_i0 PRJNA1242190 6642 326 2.086957 6.80347982 Rhabdothermincola sediminis 2751370 Bacteria Bacteria 121 7.289999999999999e-30   NR WP_208029213.1 2751370 g6635 i0 65.9 4.85889570552147 88 26 81 1 325 62 408 491 WP_208029213.1 adenosylhomocysteinase [Rhabdothermincola sediminis] diamond 1584 121 1 Bacteria   Bacillati Actinomycetota Acidimicrobiia Acidimicrobiales Iamiaceae Rhabdothermincola Rhabdothermincola sediminis
26978629 26978629 PRJNA1242190_S_NODE_3242_length_435_cov_1.569061_g3235_i0 PRJNA1242190 3242 435 1.569061 6.82541535 Brevibacillus fulvus 1125967 Bacteria Bacteria 144 2.31e-41   NR WP_204516782.1 1125967 g3235 i0 61.1 4.76551724137931 113 44 77.9 0 393 55 2 114 WP_204516782.1 group I truncated hemoglobin [Brevibacillus fulvus] diamond 2073 144 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Brevibacillus Brevibacillus fulvus
27010189 27010189 PRJNA1242190_S_NODE_4602_length_379_cov_0.944444_g4595_i0 PRJNA1242190 4602 379 0.944444 3.57944276 Leifsonia aquatica 144185 Bacteria Bacteria 137 4.2e-36   NR WP_404570005.1 144185 g4595 i0 61.1 0.997361477572559 126 49 99.7 0 1 378 106 231 WP_404570005.1 hypothetical protein [Leifsonia aquatica] diamond 378 137 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leifsonia Leifsonia aquatica
27547509 27547509 PRJNA1242190_S_NODE_12644_length_248_cov_0.891429_g12637_i0 PRJNA1242190 12644 248 0.891429 2.21074392 Leifsonia sp. C5G2 2735269 Bacteria Bacteria 139 6.030000000000001e-36   NR WP_175339017.1 2735269 g12637 i0 85.4 0.991935483870968 82 12 99.2 0 1 246 1068 1149 WP_175339017.1 Ig-like domain-containing protein [Leifsonia sp. C5G2] diamond 246 139 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leifsonia Leifsonia sp. C5G2
27989649 27989649 PRJNA1242190_S_NODE_13045_length_246_cov_0.901734_g13038_i0 PRJNA1242190 13045 246 0.901734 2.21826564 Leifsonia sp. ku-ls 2220072 Bacteria Bacteria 126 5.86e-34   NR RDV45752.1 2220072 g13038 i0 81.5 0.98780487804878 81 15 98.8 0 2 244 96 176 RDV45752.1 MerR family transcriptional regulator [Leifsonia sp. ku-ls] diamond 243 126 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leifsonia Leifsonia sp. ku-ls
28702407 28702407 PRJNA1242190_S_NODE_6387_length_332_cov_0.903475_g6380_i0 PRJNA1242190 6387 332 0.903475 2.999537 Leifsonia 110932 Bacteria Bacteria 96.7 1.04e-21   NR RDV46576.1 2220072 g6380 i0 39.1 2.81927710843373 156 5 59.6 1 55 252 1 156 RDV46576.1 SAM-dependent methyltransferase [Leifsonia sp. ku-ls] diamond 936 96.7 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leifsonia Leifsonia sp. ku-ls
28841925 28841925 PRJNA1242190_S_NODE_11628_length_254_cov_1.955801_g11621_i0 PRJNA1242190 11628 254 1.955801 4.96773454 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 56.6 4.94e-7   NR MFA5508159.1 3107663 g11621 i0 44.6 1.52362204724409 65 35 76.8 1 20 214 260 323 MFA5508159.1 hypothetical protein [Vulcanimicrobiota bacterium] diamond 387 56.6 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
29094785 29094785 PRJNA1242190_S_NODE_10108_length_272_cov_0.974874_g10101_i0 PRJNA1242190 10108 272 0.974874 2.65165728 Leifsonia sp. 1870902 Bacteria Bacteria 134 9.39e-36   NR MEN0085764.1 1870902 g10101 i0 72.2 0.992647058823529 90 25 99.3 0 271 2 23 112 MEN0085764.1 hypothetical protein [Leifsonia sp.] diamond 270 134 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leifsonia Leifsonia sp.
29126503 29126503 PRJNA1242190_S_NODE_12649_length_248_cov_0.891429_g12642_i0 PRJNA1242190 12649 248 0.891429 2.21074392 Leifsonia xyli 1575 Bacteria Bacteria 75.1 2.44e-15   NR WP_041767488.1 1575 g12642 i0 64.9 0.689516129032258 57 20 69 0 78 248 1 57 WP_041767488.1 hypothetical protein [Leifsonia xyli] diamond 171 75.1 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leifsonia Leifsonia xyli
29947264 29947264 PRJNA1242190_S_NODE_12811_length_247_cov_0.896552_g12804_i0 PRJNA1242190 12811 247 0.896552 2.21448344 Leifsonia sp. C5G2 2735269 Bacteria Bacteria 98.6 7.16e-24   NR WP_175338138.1 2735269 g12804 i0 87.9 0.704453441295547 58 7 70.4 0 1 174 112 169 WP_175338138.1 Clp protease N-terminal domain-containing protein [Leifsonia sp. C5G2] diamond 174 98.6 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leifsonia Leifsonia sp. C5G2
30578855 30578855 PRJNA1242190_S_NODE_12833_length_247_cov_0.896552_g12826_i0 PRJNA1242190 12833 247 0.896552 2.21448344 Actinomycetota bacterium 2900548 Bacteria Bacteria 99 1.8299999999999994e-23   NR MBN9629097.1 2900548 g12826 i0 75 1.49392712550607 60 15 72.9 0 247 68 162 221 MBN9629097.1 hypothetical protein [Actinomycetota bacterium] diamond 369 99 1 Bacteria   Bacillati Actinomycetota         Actinomycetota bacterium
30723518 30723518 PRJNA1242190_S_NODE_6954_length_320_cov_1.271255_g6947_i0 PRJNA1242190 6954 320 1.271255 4.068016 Bacillota 1239 Bacteria Bacteria 78.6 4.21e-16   NR WP_034562085.1 2749 g6947 i0 66.7 8.625 51 17 47.8 0 135 287 73 123 WP_034562085.1 RidA family protein [Carnobacterium gallinarum] diamond 2760 79 0.994936708860759 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Carnobacteriaceae Carnobacterium Carnobacterium gallinarum
30831808 30831808 PRJNA1242190_S_NODE_12834_length_247_cov_0.896552_g12827_i0 PRJNA1242190 12834 247 0.896552 2.21448344 Leifsonia sp. C5G2 2735269 Bacteria Bacteria 121 1.2e-30   NR WP_175339190.1 2735269 g12827 i0 79 0.983805668016194 81 17 98.4 0 247 5 292 372 WP_175339190.1 MFS transporter [Leifsonia sp. C5G2] diamond 243 121 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leifsonia Leifsonia sp. C5G2
31071271 31071271 PRJNA1242190_S_NODE_12855_length_247_cov_0.890805_g12848_i0 PRJNA1242190 12855 247 0.890805 2.20028835 Microbacteriaceae 85023 Bacteria Bacteria 135 2.09e-36   NR WP_325210271.1 1915057 g12848 i0 85 1.94331983805668 80 12 97.2 0 243 4 109 188 WP_325210271.1 site-specific integrase [Salinibacterium sp.] diamond 480 135 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Salinibacterium Salinibacterium sp.
31464288 31464288 PRJNA1242190_S_NODE_13736_length_242_cov_0.923077_g13729_i0 PRJNA1242190 13736 242 0.923077 2.23384634 Leifsonia sp. ku-ls 2220072 Bacteria Bacteria 147 5.42e-41   NR RDV43904.1 2220072 g13729 i0 85 0.991735537190083 80 12 99.2 0 1 240 22 101 RDV43904.1 D-alanine--(R)-lactate ligase [Leifsonia sp. ku-ls] diamond 240 147 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leifsonia Leifsonia sp. ku-ls
31653647 31653647 PRJNA1242190_S_NODE_13557_length_243_cov_0.917647_g13550_i0 PRJNA1242190 13557 243 0.917647 2.22988221 Leifsonia sp. ku-ls 2220072 Bacteria Bacteria 77 1.19e-16   NR RDV46573.1 2220072 g13550 i0 86.4 0.54320987654321 44 6 54.3 0 2 133 18 61 RDV46573.1 hypothetical protein DOE76_00500 [Leifsonia sp. ku-ls] diamond 132 77 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leifsonia Leifsonia sp. ku-ls
32096704 32096704 PRJNA1242190_S_NODE_13718_length_242_cov_0.923077_g13711_i0 PRJNA1242190 13718 242 0.923077 2.23384634 Leifsonia sp. ku-ls 2220072 Bacteria Bacteria 105 2.25e-27   NR RDV43800.1 2220072 g13711 i0 81.1 0.91735537190082606 74 11 91.7 1 1 222 25 95 RDV43800.1 hypothetical protein DOE76_16260 [Leifsonia sp. ku-ls] diamond 222 105 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leifsonia Leifsonia sp. ku-ls
32128567 32128567 PRJNA1242190_S_NODE_13198_length_245_cov_0.906977_g13191_i0 PRJNA1242190 13198 245 0.906977 2.22209365 Leifsonia sp. ku-ls 2220072 Bacteria Bacteria 58.5 8.04e-8   NR RDV46100.1 2220072 g13191 i0 59.5 0.906122448979592 74 20 84.5 3 209 3 1 69 RDV46100.1 murein L,D-transpeptidase [Leifsonia sp. ku-ls] diamond 222 58.5 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leifsonia Leifsonia sp. ku-ls
32286895 32286895 PRJNA1242190_S_NODE_13699_length_242_cov_0.923077_g13692_i0 PRJNA1242190 13699 242 0.923077 2.23384634 Leifsonia sp. ku-ls 2220072 Bacteria Bacteria 111 1.26e-27   NR RDV45398.1 2220072 g13692 i0 91.9 0.768595041322314 62 5 76.9 0 186 1 1 62 RDV45398.1 universal stress protein [Leifsonia sp. ku-ls] diamond 186 111 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leifsonia Leifsonia sp. ku-ls
32526522 32526522 PRJNA1242190_S_NODE_6099_length_337_cov_1.693182_g6092_i0 PRJNA1242190 6099 337 1.693182 5.70602334 Paenibacillus 44249 Bacteria Bacteria 137 3.99e-39   NR MCG0239086.1 1879010 g6092 i0 62.7 2.70623145400593 102 38 90.8 0 24 329 5 106 MCG0239086.1 group 1 truncated hemoglobin [Bacillota bacterium] diamond 912 137 1 Bacteria   Bacillati Bacillota         Bacillota bacterium
32539926 32539926 PRJNA1242190_S_NODE_12499_length_249_cov_0.886364_g12492_i0 PRJNA1242190 12499 249 0.886364 2.20704636 Leifsonia sp. C5G2 2735269 Bacteria Bacteria 61.2 9.37e-10   NR WP_175336827.1 2735269 g12492 i0 94.6 0.44578313253012 37 2 44.6 0 137 247 1 37 WP_175336827.1 hypothetical protein [Leifsonia sp. C5G2] diamond 111 61.2 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leifsonia Leifsonia sp. C5G2
32539927 32539927 PRJNA1242190_S_NODE_13359_length_244_cov_0.912281_g13352_i0 PRJNA1242190 13359 244 0.912281 2.22596564 unclassified Leifsonia 2663824 Bacteria Bacteria 118 1.59e-29   NR WP_085368222.1 2663824 g13352 i0 72.8 0.995901639344262 81 22 99.6 0 244 2 159 239 WP_085368222.1 MULTISPECIES: MFS transporter [unclassified Leifsonia] diamond 243 118 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leifsonia  

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;