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contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA1241156" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 24 ✖

bioproject 1

  • PRJNA1241156 · 24 ✖

analysis 1

  • diamond · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3601300 3601300 PRJNA1241156_S_NODE_563_length_2021_cov_107.843782_g547_i1 PRJNA1241156 563 2021 107.843782 2179.52283422 Moloney murine leukemia virus 11801 Viruses Viruses 1216 0   NR NP_057933.2 11801 g547 i1 97.7 2.75210291934686 618 14 91.7 0 1864 11 718 1335 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 5562 1216 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
16927406 16927406 PRJNA1241156_S_NODE_554_length_2129_cov_103.581016_g547_i0 PRJNA1241156 554 2129 103.581016 2205.23983064 Moloney murine leukemia virus 11801 Viruses Viruses 1291 0   NR NP_057933.2 11801 g547 i0 97.6 2.78581493658995 659 16 92.9 0 143 2119 677 1335 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 5931 1291 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
26711565 26711565 PRJNA1241156_S_NODE_55201_length_264_cov_1.085973_g54741_i0 PRJNA1241156 55201 264 1.085973 2.86696872 Gammaretrovirus 153135 Viruses Viruses 168 3.07e-46   NR NP_057933.2 11801 g54741 i0 97.7 1.97727272727273 87 2 98.9 0 262 2 1243 1329 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 522 168 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
27136346 27136346 PRJNA1241156_S_NODE_52422_length_270_cov_2.947137_g51962_i0 PRJNA1241156 52422 270 2.947137 7.9572699 Erythrocytic necrosis virus 1543320 Viruses Viruses 79.3 1.21e-16   NR QCF47480.1 1543320 g51962 i0 61.9 0.7 63 23 68.9 1 50 235 67 129 QCF47480.1 putative RNA-dependent DNA polymerase [Erythrocytic necrosis virus] diamond 189 79.3 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
27294830 27294830 PRJNA1241156_S_NODE_48243_length_280_cov_4.987342_g47783_i0 PRJNA1241156 48243 280 4.987342 13.9645576 Human endogenous retrovirus K 45617 Viruses Viruses 70.5 1.04e-11   NR CAA76882.1 45617 g47783 i0 49.3 4.82142857142857 75 38 80.4 0 235 11 199 273 CAA76882.1 pol protein [Human endogenous retrovirus K] diamond 1350 71.2 0.990168539325843 Viruses Human endogenous retroviruses Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae   Human endogenous retrovirus K
27673992 27673992 PRJNA1241156_S_NODE_71844_length_221_cov_4.292135_g71384_i0 PRJNA1241156 71844 221 4.292135 9.48561835 Astyanax tetra cavefish adintovirus 2609866 Viruses Viruses 59.7 1.4e-8   NR DAC81259.1 2609866 g71384 i0 72.2 0.48868778280543 36 10 48.9 0 8 115 185 220 DAC81259.1 TPA_asm: FtsK [Astyanax tetra cavefish adintovirus] diamond 108 59.7 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Astyanax tetra cavefish adintovirus
28241958 28241958 PRJNA1241156_S_NODE_50846_length_274_cov_2.233766_g50386_i0 PRJNA1241156 50846 274 2.233766 6.12051884 Moloney murine leukemia virus 11801 Viruses Viruses 160 3.3599999999999992e-43   NR NP_057933.2 11801 g50386 i0 98.8 1.77372262773723 81 1 88.7 0 273 31 1155 1235 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 486 160 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
28544620 28544620 PRJNA1241156_S_NODE_12547_length_404_cov_4.498615_g12087_i0 PRJNA1241156 12547 404 4.498615 18.1744046 Astyanax tetra cavefish adintovirus 2609866 Viruses Viruses 76.3 6.66e-14   NR YP_010796956.1 2609866 g12087 i0 64.7 0.764851485148515 51 18 37.9 0 252 404 153 203 YP_010796956.1 FtsK [Terrapene box turtle adintovirus] diamond 309 77 0.990909090909091 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Amphintovirales Eupolintoviridae Betadintovirus Astyanax tetra cavefish adintovirus
28747334 28747334 PRJNA1241156_S_NODE_14027_length_394_cov_7.481481_g13567_i0 PRJNA1241156 14027 394 7.481481 29.47703514 Erythrocytic necrosis virus 1543320 Viruses Viruses 54.7 2.16e-6   NR QCF47477.1 1543320 g13567 i0 53.7 0.411167512690355 54 25 41.1 0 180 19 18 71 QCF47477.1 putative RNA-dependent DNA polymerase [Erythrocytic necrosis virus] diamond 162 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
28778791 28778791 PRJNA1241156_S_NODE_36847_length_311_cov_2.115672_g36387_i0 PRJNA1241156 36847 311 2.115672 6.57973992 Erythrocytic necrosis virus 1543320 Viruses Viruses 86.7 1.8e-19   NR QCF47486.1 1543320 g36387 i0 95.6 0.434083601286174 45 2 43.4 0 310 176 52 96 QCF47486.1 putative RNA-dependent DNA polymerase, partial [Erythrocytic necrosis virus] diamond 135 86.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
29378821 29378821 PRJNA1241156_S_NODE_14129_length_394_cov_2.655271_g13669_i0 PRJNA1241156 14129 394 2.655271 10.46176774 Erythrocytic necrosis virus 1543320 Viruses Viruses 103 2.09e-25   NR QCF47477.1 1543320 g13669 i0 73.2 0.540609137055838 71 19 54.1 0 177 389 1 71 QCF47477.1 putative RNA-dependent DNA polymerase [Erythrocytic necrosis virus] diamond 213 103 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
29441680 29441680 PRJNA1241156_S_NODE_32850_length_322_cov_2.465950_g32390_i0 PRJNA1241156 32850 322 2.46595 7.940359 Gammaretrovirus murleu 3428959 Viruses Viruses 225 1.91e-69   NR 8WUS_E 11801 g32390 i0 100 7.97515527950311 107 0 99.7 0 1 321 149 255 8WUS_E Chain E, Gag-Pol polyprotein [Moloney murine leukemia virus] diamond 2568 225 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
29441682 29441682 PRJNA1241156_S_NODE_73670_length_210_cov_9.832335_g73210_i0 PRJNA1241156 73670 210 9.832335 20.6479035 Erythrocytic necrosis virus 1543320 Viruses Viruses 46.2 3.45e-4   NR QCF47486.1 1543320 g73210 i0 72.4 0.828571428571429 29 8 41.4 0 208 122 71 99 QCF47486.1 putative RNA-dependent DNA polymerase, partial [Erythrocytic necrosis virus] diamond 174 46.2 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
29694203 29694203 PRJNA1241156_S_NODE_62850_length_248_cov_0.965854_g62390_i0 PRJNA1241156 62850 248 0.965854 2.39531792 Caudoviricetes sp. 2832643 Viruses Viruses 60.5 2.21e-8   NR DAR64507.1 2832643 g62390 i0 78 0.495967741935484 41 9 49.6 0 123 1 1 41 DAR64507.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 123 60.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
29820621 29820621 PRJNA1241156_S_NODE_12891_length_402_cov_3.242340_g12431_i0 PRJNA1241156 12891 402 3.24234 13.0342068 Erythrocytic necrosis virus 1543320 Viruses Viruses 57 2.51e-7   NR QCF47480.1 1543320 g12431 i0 83.9 0.23134328358209 31 5 23.1 0 234 326 1 31 QCF47480.1 putative RNA-dependent DNA polymerase [Erythrocytic necrosis virus] diamond 93 57 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
30547497 30547497 PRJNA1241156_S_NODE_23833_length_351_cov_2.613636_g23373_i0 PRJNA1241156 23833 351 2.613636 9.17386236 uncultured Caudovirales phage 2100421 Viruses Viruses 96.3 2.03e-21   NR CAB4124299.1 2100421 g23373 i0 43.9 0.837606837606838 98 54 82.9 1 45 335 170 267 CAB4124299.1 WcaG Nucleoside-diphosphate-sugar epimerases [uncultured Caudovirales phage] diamond 294 96.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
30642123 30642123 PRJNA1241156_S_NODE_20913_length_362_cov_1.877743_g20453_i0 PRJNA1241156 20913 362 1.877743 6.79742966 Gammaretrovirus murleu 3428959 Viruses Viruses 244 1.08e-76   NR 8WUS_E 11801 g20453 i0 99.2 3.97790055248619 120 1 99.4 0 3 362 256 375 8WUS_E Chain E, Gag-Pol polyprotein [Moloney murine leukemia virus] diamond 1440 244 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
31053313 31053313 PRJNA1241156_S_NODE_36555_length_311_cov_10.156716_g36095_i0 PRJNA1241156 36555 311 10.156716 31.58738676 Larimichthys croaker adintovirus 2609857 Viruses Viruses 135 7.92e-36   NR DAC81309.1 2609857 g36095 i0 64.6 0.92604501607717 96 34 92.6 0 21 308 177 272 DAC81309.1 TPA_asm: integrase [Larimichthys croaker adintovirus] diamond 288 135 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Larimichthys croaker adintovirus
31387464 31387464 PRJNA1241156_S_NODE_22696_length_355_cov_3.099359_g22236_i0 PRJNA1241156 22696 355 3.099359 11.00272445 Viruses 10239 Viruses Viruses 65.9 1.73e-10   NR DAC81313.1 2609857 g22236 i0 50 0.963380281690141 56 24 43.9 1 122 277 67 122 DAC81313.1 TPA_asm: adenain [Larimichthys croaker adintovirus] diamond 342 65.9 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Larimichthys croaker adintovirus
31400963 31400963 PRJNA1241156_S_NODE_12876_length_402_cov_3.757660_g12416_i0 PRJNA1241156 12876 402 3.75766 15.1057932 Erythrocytic necrosis virus 1543320 Viruses Viruses 58.9 1.72e-8   NR QCF47503.1 1543320 g12416 i0 68.3 0.305970149253731 41 11 29.1 1 157 273 1 41 QCF47503.1 putative tyrosine kinase [Erythrocytic necrosis virus] diamond 123 58.9 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
31653627 31653627 PRJNA1241156_S_NODE_54297_length_266_cov_0.959641_g53837_i0 PRJNA1241156 54297 266 0.959641 2.55264506 Retroviridae sp. 2681591 Viruses Viruses 99.4 6.160000000000001e-22   NR XNT20491.1 2681591 g53837 i0 54.5 0.992481203007519 88 38 99.2 1 265 2 89 174 XNT20491.1 MAG: hypothetical protein, partial [Retroviridae sp.] diamond 264 99.4 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae   Retroviridae sp.
32286885 32286885 PRJNA1241156_S_NODE_64899_length_243_cov_8.370000_g64439_i0 PRJNA1241156 64899 243 8.37 20.3391 Caudoviricetes sp. 2832643 Viruses Viruses 64.3 6.83e-10   NR DAU46120.1 2832643 g64439 i0 44.2 0.950617283950617 77 43 95.1 0 3 233 174 250 DAU46120.1 MAG TPA: upper collar protein [Caudoviricetes sp.] diamond 231 64.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
32350033 32350033 PRJNA1241156_S_NODE_54399_length_265_cov_6.702703_g53939_i0 PRJNA1241156 54399 265 6.702703 17.76216295 Erythrocytic necrosis virus 1543320 Viruses Viruses 70.1 3.19e-13   NR QCF47486.1 1543320 g53939 i0 89.5 0.860377358490566 38 4 43 0 227 114 41 78 QCF47486.1 putative RNA-dependent DNA polymerase, partial [Erythrocytic necrosis virus] diamond 228 70.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
32823202 32823202 PRJNA1241156_S_NODE_18240_length_373_cov_2.624242_g17780_i0 PRJNA1241156 18240 373 2.624242 9.78842266 Caudoviricetes sp. 2832643 Viruses Viruses 54.3 9.53e-7   NR DAQ86025.1 2832643 g17780 i0 50 3.78016085790885 48 24 38.6 0 337 194 39 86 DAQ86025.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 1410 54.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;