RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1240805" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1240805 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26756876 26756876 PRJNA1240805_P_NODE_6841_length_175_cov_5.682540_g6792_i0 PRJNA1240805 6841 175 5.68254 9.944445 Ramicandelaber brevisporus 304332 Fungi Fungi 63.2 9.44e-10   NR KAI8872471.1 304332 g6792 i0 59.2 0.84 49 19 82.3 1 31 174 531 579 KAI8872471.1 hypothetical protein GQ42DRAFT_174340 [Ramicandelaber brevisporus] diamond 147 63.2 1 Eukaryota Opisthokonta Fungi Zoopagomycota   Ramicandelaberales Ramicandelaberaceae Ramicandelaber Ramicandelaber brevisporus
27768763 27768763 PRJNA1240805_P_NODE_2424_length_304_cov_17.023529_g2375_i0 PRJNA1240805 2424 304 17.023529 51.75152816 Coemansia sp. RSA 2399 2849852 Fungi Fungi 47.4 0.00165   NR KAJ1801352.1 2849852 g2375 i0 75 0.819078947368421 28 7 27.6 0 239 156 313 340 KAJ1801352.1 60S ribosomal protein L4B [Coemansia sp. RSA 2399] diamond 249 47.4 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Coemansia Coemansia sp. RSA 2399

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;