RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1240805" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1240805 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14378494 14378494 PRJNA1240805_P_NODE_4772_length_209_cov_6.975000_g4723_i0 PRJNA1240805 4772 209 6.975 14.57775 Eukaryota 2759 Fungi Fungi 108 2.51e-28   NR KAI5149971.1 1912989 g4723 i0 82.3 2.66985645933014 62 11 89 0 187 2 95 156 KAI5149971.1 small subunit ribosomal protein S14e [Enteropsectra breve] diamond 558 108 1 Eukaryota Opisthokonta Fungi Microsporidia       Enteropsectra Enteropsectra breve
29347325 29347325 PRJNA1240805_P_NODE_4649_length_212_cov_7.944785_g4600_i0 PRJNA1240805 4649 212 7.944785 16.8429442 Vittaforma corneae ATCC 5 42399 Fungi Fungi 78.6 7.62e-16   NR XP_007605062.1 993615 g4600 i0 58 0.976415094339623 69 29 97.6 0 4 210 141 209 XP_007605062.1 uncharacterized protein VICG_01617 [Vittaforma corneae ATCC 50505] diamond 207 78.6 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
31464276 31464276 PRJNA1240805_P_NODE_7736_length_166_cov_2.068376_g7687_i0 PRJNA1240805 7736 166 2.068376 3.43350416 Nematocida sp. LUAm3 2670340 Fungi Fungi 54.7 3.26e-7   NR KAI5170870.1 2670340 g7687 i0 61.9 0.759036144578313 42 16 75.9 0 165 40 133 174 KAI5170870.1 large subunit ribosomal protein L11e [Nematocida sp. LUAm3] diamond 126 54.7 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida sp. LUAm3
31906860 31906860 PRJNA1240805_P_NODE_2097_length_332_cov_6.424028_g2048_i0 PRJNA1240805 2097 332 6.424028 21.32777296 Vittaforma corneae ATCC 5 42399 Fungi Fungi 119 9.06e-30   NR XP_007605485.1 993615 g2048 i0 58.6 0.786144578313253 87 36 78.6 0 5 265 70 156 XP_007605485.1 uncharacterized protein VICG_02040 [Vittaforma corneae ATCC 50505] diamond 261 119 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;