RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA1240805" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1240805 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24575810 24575810 PRJNA1240805_P_NODE_7980_length_164_cov_1.773913_g7931_i0 PRJNA1240805 7980 164 1.773913 2.90921732 Naegleria 5761 Heterolobosea other_Eukaryota 70.9 1.53e-12   NR XP_044557931.1 5763 g7931 i0 82.5 2.14024390243902 40 7 73.2 0 42 161 196 235 XP_044557931.1 uncharacterized protein FDP41_008425 [Naegleria fowleri] diamond 351 70.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
28021281 28021281 PRJNA1240805_P_NODE_4365_length_219_cov_10.452941_g4316_i0 PRJNA1240805 4365 219 10.452941 22.89194079 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 75.9 3.21e-14   NR XP_044565141.1 5763 g4316 i0 48.5 2.79452054794521 68 35 93.2 0 16 219 219 286 XP_044565141.1 uncharacterized protein FDP41_013642 [Naegleria fowleri] diamond 612 75.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
28052624 28052624 PRJNA1240805_P_NODE_4045_length_229_cov_8.888889_g3996_i0 PRJNA1240805 4045 229 8.888889 20.35555581 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 90.1 4.81e-19   NR XP_044548650.1 51637 g3996 i0 62.3 0.903930131004367 69 26 90.4 0 23 229 358 426 XP_044548650.1 uncharacterized protein C9374_004938 [Naegleria lovaniensis] diamond 207 90.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
28747329 28747329 PRJNA1240805_P_NODE_447_length_724_cov_1.597037_g411_i0 PRJNA1240805 447 724 1.597037 11.56254788 Acrasis kona 1008807 Heterolobosea other_Eukaryota 67.4 5.05e-9   NR KAL0477121.1 1008807 g411 i0 32 0.505524861878453 122 80 50.6 2 318 683 208 326 KAL0477121.1 CBP20 [Acrasis kona] diamond 366 67.4 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
31875085 31875085 PRJNA1240805_P_NODE_6897_length_175_cov_1.484127_g6848_i0 PRJNA1240805 6897 175 1.484127 2.59722225 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 46.6 3.7e-4   NR XP_044568412.1 5763 g6848 i0 48.1 0.891428571428571 52 25 85.7 1 152 3 59 110 XP_044568412.1 uncharacterized protein FDP41_007614 [Naegleria fowleri] diamond 156 46.6 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
32019930 32019930 PRJNA1240805_P_NODE_3838_length_236_cov_3.133690_g3789_i0 PRJNA1240805 3838 236 3.13369 7.3955084 Naegleria 5761 Heterolobosea other_Eukaryota 100 6.55e-23   NR XP_044568048.1 5763 g3789 i0 83.9 1.42372881355932 56 8 71.2 1 231 64 388 442 XP_044568048.1 uncharacterized protein FDP41_010400 [Naegleria fowleri] diamond 336 100 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;