RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1240805" and tax_phylum = "Cyanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Cyanobacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1240805 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31843460 31843460 PRJNA1240805_P_NODE_4157_length_225_cov_3.875000_g4108_i0 PRJNA1240805 4157 225 3.875 8.71875 Spirulina sp. SIO3F2 2607816 Bacteria Bacteria 43.5 0.0166   NR NEO86019.1 2607816 g4108 i0 40 1.86666666666667 70 34 82.7 3 13 198 1084 1153 NEO86019.1 DUF11 domain-containing protein [Spirulina sp. SIO3F2] diamond 420 43.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Spirulinales Spirulinaceae Spirulina Spirulina sp. SIO3F2
32634011 32634011 PRJNA1240805_P_NODE_4240_length_223_cov_1.465517_g4191_i0 PRJNA1240805 4240 223 1.465517 3.26810291 Cyanobacteriota bacterium 2847862 Bacteria Bacteria 132 1.2499999999999999e-34   NR MEY3369554.1 2847862 g4191 i0 95.5 2.66367713004484 66 3 88.8 0 24 221 232 297 MEY3369554.1 hypothetical protein [Cyanobacteriota bacterium] diamond 594 132 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;