RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1240804" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1240804 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32001671 32001671 PRJNA1240804_P_NODE_122958_length_166_cov_2.401709_g122592_i0 PRJNA1240804 122958 166 2.401709 3.98683694 Candidatus Eremiobacteraceae bacterium 3069296 Bacteria Bacteria 68.9 7.56e-12   NR HXM14140.1 3069296 g122592 i0 64.7 1.8433734939759 51 18 92.2 0 1 153 245 295 HXM14140.1 hypothetical protein [Candidatus Eremiobacteraceae bacterium] diamond 306 68.9 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Candidatus Eremiobacterales Candidatus Eremiobacteraceae   Candidatus Eremiobacteraceae bacterium
32602721 32602721 PRJNA1240804_P_NODE_145620_length_163_cov_0.912281_g145254_i0 PRJNA1240804 145620 163 0.912281 1.48701803 Candidatus Baltobacteraceae bacterium 3107660 Bacteria Bacteria 60.8 4.17e-9   NR HTA56600.1 2952909 g145254 i0 59.2 0.901840490797546 49 20 90.2 0 148 2 140 188 HTA56600.1 hypothetical protein [Candidatus Baltobacteraceae bacterium] diamond 147 60.8 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae   Candidatus Baltobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;