RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1240804" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1240804 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28084078 28084078 PRJNA1240804_P_NODE_120165_length_167_cov_0.881356_g119799_i0 PRJNA1240804 120165 167 0.881356 1.47186452 Ignavibacteria bacterium 2053306 Bacteria Bacteria 100 4.419999999999999e-23   NR MBX7041711.1 2053306 g119799 i0 93.6 0.844311377245509 47 3 84.4 0 167 27 137 183 MBX7041711.1 hypothetical protein [Ignavibacteria bacterium] diamond 141 100 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
30673725 30673725 PRJNA1240804_P_NODE_72073_length_192_cov_1.279720_g71707_i0 PRJNA1240804 72073 192 1.27972 2.4570624 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 91.7 1.69e-20   NR MEI9973197.1 2026749 g71707 i0 80.7 1.78125 57 11 89.1 0 8 178 16 72 MEI9973197.1 M14 family zinc carboxypeptidase [Ignavibacteriota bacterium] diamond 342 91.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
30958354 30958354 PRJNA1240804_P_NODE_87394_length_181_cov_2.083333_g87028_i0 PRJNA1240804 87394 181 2.083333 3.77083273 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 79.3 2.07e-15   NR RPI67065.1 2026749 g87028 i0 63.6 0.911602209944751 55 20 91.2 0 1 165 169 223 RPI67065.1 MAG: hypothetical protein EHM43_10055, partial [Ignavibacteriota bacterium] diamond 165 79.3 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;