RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1240804" and tax_phylum = "Candidatus Blackallbacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Blackallbacteria · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1240804 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28621087 28621087 PRJNA1240804_P_NODE_143267_length_163_cov_0.912281_g142901_i0 PRJNA1240804 143267 163 0.912281 1.48701803 bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_5 2014262 Bacteria Bacteria 81.3 3.16e-16   NR PIQ23876.1 2014262 g142901 i0 76.6 0.865030674846626 47 11 86.5 0 142 2 75 121 PIQ23876.1 MAG: hypothetical protein COW64_22265 [bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_50_49_26] diamond 141 81.3 1 Bacteria Bacteria candidate phyla   Candidatus Blackallbacteria         bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_50_49_26
29239114 29239114 PRJNA1240804_P_NODE_138429_length_164_cov_0.904348_g138063_i0 PRJNA1240804 138429 164 0.904348 1.48313072 Bacteria 2 Bacteria Bacteria 93.2 1.36e-20   NR PIQ27555.1 2014262 g138063 i0 89.8 3.60365853658537 49 5 89.6 0 152 6 308 356 PIQ27555.1 MAG: hypothetical protein COW64_06910 [bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_50_49_26] diamond 591 94 0.991489361702128 Bacteria Bacteria candidate phyla   Candidatus Blackallbacteria         bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_50_49_26

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;