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contig_metadata

33 rows where analysis = "diamond", bioproject = "PRJNA1240804" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 33 ✖

bioproject 1

  • PRJNA1240804 · 33 ✖

analysis 1

  • diamond · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12528498 12528498 PRJNA1240804_P_NODE_109190_length_169_cov_0.866667_g108824_i0 PRJNA1240804 109190 169 0.866667 1.46466723 Bacillariaceae sp. 3061772 SAR_Eukaryotes SAR_Eukaryotes 94.7 5.13e-21   NR KAL3924210.1 3061772 g108824 i0 95.7 4.08284023668639 46 2 81.7 0 7 144 284 329 KAL3924210.1 MAG: hypothetical protein SGILL_001187 [Bacillariaceae sp.] diamond 690 94.7 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae   Bacillariaceae sp.
25276055 25276055 PRJNA1240804_P_NODE_116520_length_168_cov_0.873950_g116154_i0 PRJNA1240804 116520 168 0.87395 1.468236 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 79 1.86e-15   NR XP_001020279.2 312017 g116154 i0 67.3 0.928571428571429 52 17 92.9 0 157 2 159 210 XP_001020279.2 DEAD/DEAH-box helicase [Tetrahymena thermophila SB210] diamond 156 79 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
26616829 26616829 PRJNA1240804_P_NODE_116781_length_168_cov_0.873950_g116415_i0 PRJNA1240804 116781 168 0.87395 1.468236 Symbiodinium 2949 SAR_Eukaryotes SAR_Eukaryotes 58.5 3.55e-8   NR OLQ07917.1 2951 g116415 i0 53.8 1.85714285714286 52 24 92.9 0 6 161 982 1033 OLQ07917.1 hypothetical protein AK812_SmicGene8646 [Symbiodinium microadriaticum] diamond 312 58.5 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium microadriaticum
26743103 26743103 PRJNA1240804_P_NODE_124561_length_166_cov_0.888889_g124195_i0 PRJNA1240804 124561 166 0.888889 1.47555574 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.00388   NR CAD8074567.1 5886 g124195 i0 55.6 1.26506024096386 36 16 65.1 0 121 14 1112 1147 CAD8074567.1 unnamed protein product [Paramecium primaurelia] diamond 210 44.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia
26883871 26883871 PRJNA1240804_P_NODE_79501_length_187_cov_1.173913_g79135_i0 PRJNA1240804 79501 187 1.173913 2.19521731 Cladocopium goreaui 2562237 SAR_Eukaryotes SAR_Eukaryotes 54.3 1.41e-6   NR CAL1157899.1 2562237 g79135 i0 48 0.802139037433155 50 26 80.2 0 168 19 33 82 CAL1157899.1 unnamed protein product, partial [Cladocopium goreaui] diamond 150 54.3 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Cladocopium Cladocopium goreaui
26946822 26946822 PRJNA1240804_P_NODE_122502_length_167_cov_0.881356_g122136_i0 PRJNA1240804 122502 167 0.881356 1.47186452 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 49.3 6.48e-5   NR SPQ98708.1 37360 g122136 i0 51.4 1.32934131736527 37 18 66.5 0 3 113 619 655 SPQ98708.1 unnamed protein product [Plasmodiophora brassicae] diamond 222 49.3 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
27136281 27136281 PRJNA1240804_P_NODE_25482_length_283_cov_2.893162_g25116_i0 PRJNA1240804 25482 283 2.893162 8.18764846 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 49.7 3.66e-5   NR XP_012652362.1 312017 g25116 i0 50 1.01766784452297 48 24 50.9 0 50 193 24 71 XP_012652362.1 hypothetical protein TTHERM_000294739 [Tetrahymena thermophila SB210] diamond 288 49.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
27231541 27231541 PRJNA1240804_P_NODE_63483_length_201_cov_0.934211_g63117_i0 PRJNA1240804 63483 201 0.934211 1.87776411 Polarella glacialis 89957 SAR_Eukaryotes SAR_Eukaryotes 50.8 3.02e-5   NR CAE8614562.1 89957 g63117 i0 56 0.746268656716418 50 22 74.6 0 186 37 210 259 CAE8614562.1 unnamed protein product [Polarella glacialis] diamond 150 50.8 1 Eukaryota Sar     Dinophyceae Suessiales Suessiaceae Polarella Polarella glacialis
27344745 27344745 PRJNA1240804_P_NODE_131643_length_165_cov_0.896552_g131277_i0 PRJNA1240804 131643 165 0.896552 1.4793108 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 100 6.779999999999999e-23   NR XP_024578659.1 4781 g131277 i0 87.5 12.2181818181818 48 6 87.3 0 18 161 414 461 XP_024578659.1 myosin-like protein [Plasmopara halstedii] diamond 2016 100 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
27515920 27515920 PRJNA1240804_P_NODE_78983_length_187_cov_1.442029_g78617_i0 PRJNA1240804 78983 187 1.442029 2.69659423 Polarella glacialis 89957 SAR_Eukaryotes SAR_Eukaryotes 52.4 6.92e-6   NR CAK0848098.1 89957 g78617 i0 47.1 2.18181818181818 68 21 91.4 2 9 179 409 472 CAK0848098.1 unnamed protein product, partial [Polarella glacialis] diamond 408 52.4 1 Eukaryota Sar     Dinophyceae Suessiales Suessiaceae Polarella Polarella glacialis
28544595 28544595 PRJNA1240804_P_NODE_133527_length_165_cov_0.896552_g133161_i0 PRJNA1240804 133527 165 0.896552 1.4793108 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 75.1 5.18e-14   NR XP_001015210.1 312017 g133161 i0 84.4 2.45454545454545 45 7 81.8 0 135 1 1694 1738 XP_001015210.1 hypothetical protein TTHERM_00509060 [Tetrahymena thermophila SB210] diamond 405 75.1 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
28557894 28557894 PRJNA1240804_P_NODE_113967_length_168_cov_0.873950_g113601_i0 PRJNA1240804 113967 168 0.87395 1.468236 Symbiodinium microadriaticum 2951 SAR_Eukaryotes SAR_Eukaryotes 42 0.0256   NR OLQ06841.1 2951 g113601 i0 38.1 0.75 42 21 66.1 1 118 8 2137 2178 OLQ06841.1 hypothetical protein AK812_SmicGene9831 [Symbiodinium microadriaticum] diamond 126 42 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium microadriaticum
28702384 28702384 PRJNA1240804_P_NODE_154347_length_152_cov_2.417476_g153981_i0 PRJNA1240804 154347 152 2.417476 3.67456352 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 62.4 1.24e-9   NR KAE9033809.1 129364 g153981 i0 75 31.4605263157895 36 9 71.1 0 145 38 828 863 KAE9033809.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Phytophthora rubi] diamond 4782 62.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora rubi
29631042 29631042 PRJNA1240804_P_NODE_66590_length_197_cov_1.371622_g66224_i0 PRJNA1240804 66590 197 1.371622 2.70209534 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 102 1.35e-24   NR XP_029215743.1 94643 g66224 i0 75 1.82741116751269 60 15 91.4 0 15 194 191 250 XP_029215743.1 ribosomal protein RPS4 [Besnoitia besnoiti] diamond 360 102 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
29788996 29788996 PRJNA1240804_P_NODE_115531_length_168_cov_0.873950_g115165_i0 PRJNA1240804 115531 168 0.87395 1.468236 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 49.3 6.84e-5   NR XP_001021958.1 312017 g115165 i0 56.1 0.732142857142857 41 18 73.2 0 135 13 785 825 XP_001021958.1 hypothetical protein TTHERM_00859180 [Tetrahymena thermophila SB210] diamond 123 49.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
30533927 30533927 PRJNA1240804_P_NODE_114453_length_168_cov_0.873950_g114087_i0 PRJNA1240804 114453 168 0.87395 1.468236 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 86.3 2.89e-18   NR EJK44957.1 159749 g114087 i0 80.4 2.75 51 10 91.1 0 3 155 270 320 EJK44957.1 hypothetical protein THAOC_36465 [Thalassiosira oceanica] diamond 462 86.3 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira oceanica
30597056 30597056 PRJNA1240804_P_NODE_122033_length_167_cov_0.881356_g121667_i0 PRJNA1240804 122033 167 0.881356 1.47186452 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 82.4 1.36e-16   NR OMJ95737.1 5963 g121667 i0 79.6 1.76047904191617 49 10 88 0 152 6 487 535 OMJ95737.1 hypothetical protein SteCoe_808 [Stentor coeruleus] diamond 294 82.8 0.995169082125604 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
30660365 30660365 PRJNA1240804_P_NODE_73093_length_191_cov_1.457746_g72727_i0 PRJNA1240804 73093 191 1.457746 2.78429486 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 99.8 1.59e-22   NR KAL3762442.1 259834 g72727 i0 80.7 3.59685863874346 57 11 89.5 0 15 185 584 640 KAL3762442.1 hypothetical protein ACHAWU_008145 [Discostella pseudostelligera] diamond 687 99.8 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Discostella Discostella pseudostelligera
30691886 30691886 PRJNA1240804_P_NODE_128913_length_165_cov_1.784483_g128547_i0 PRJNA1240804 128913 165 1.784483 2.94439695 root 1 Root_unresolved Root_unresolved 59.3 1.8e-8   NR XP_013249558.1 5801 g128547 i0 61.5 3.50909090909091 39 15 70.9 0 48 164 23 61 XP_013249558.1 5-aminolevulinic acid synthase, putative [Eimeria acervulina] diamond 579 59.7 0.993299832495812 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
30926845 30926845 PRJNA1240804_P_NODE_97074_length_175_cov_1.523810_g96708_i0 PRJNA1240804 97074 175 1.52381 2.6666675 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 49.7 5.48e-5   NR CDW73481.1 5949 g96708 i0 43.9 0.977142857142857 57 28 90.9 1 16 174 4641 4697 CDW73481.1 ubiquitin-activating enzyme e1 family protein [Stylonychia lemnae] diamond 171 49.7 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
31115876 31115876 PRJNA1240804_P_NODE_133495_length_165_cov_0.896552_g133129_i0 PRJNA1240804 133495 165 0.896552 1.4793108 Nitzschia inconspicua 303405 SAR_Eukaryotes SAR_Eukaryotes 95.9 6.63e-23   NR KAG7355908.1 303405 g133129 i0 100 0.909090909090909 50 0 90.9 0 16 165 5 54 KAG7355908.1 chlorophyll A-B binding protein [Nitzschia inconspicua] diamond 150 95.9 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua
31115884 31115884 PRJNA1240804_P_NODE_138935_length_164_cov_0.904348_g138569_i0 PRJNA1240804 138935 164 0.904348 1.48313072 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 55.8 8.23e-8   NR KRX03893.1 266149 g138569 i0 44.9 0.896341463414634 49 27 89.6 0 149 3 18 66 KRX03893.1 hypothetical protein PPERSA_04771 [Pseudocohnilembus persalinus] diamond 147 55.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
31369366 31369366 PRJNA1240804_P_NODE_96396_length_175_cov_6.206349_g96030_i0 PRJNA1240804 96396 175 6.206349 10.86111075 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.00391   NR XP_012653513.1 312017 g96030 i0 38.5 0.891428571428571 52 32 89.1 0 19 174 57 108 XP_012653513.1 MFS transporter [Tetrahymena thermophila SB210] diamond 156 44.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
31590649 31590649 PRJNA1240804_P_NODE_136276_length_164_cov_0.904348_g135910_i0 PRJNA1240804 136276 164 0.904348 1.48313072 Phytophthora cactorum 29920 SAR_Eukaryotes SAR_Eukaryotes 45.1 0.00198   NR KAG2790828.1 29920 g135910 i0 56 0.914634146341463 50 19 86 1 15 155 72 121 KAG2790828.1 hypothetical protein Pcac1_g329 [Phytophthora cactorum] diamond 150 45.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
31748576 31748576 PRJNA1240804_P_NODE_98557_length_174_cov_1.560000_g98191_i0 PRJNA1240804 98557 174 1.56 2.7144 Polarella glacialis 89957 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.00306   NR CAK0793109.1 89957 g98191 i0 41.5 0.913793103448276 53 31 91.4 0 16 174 122 174 CAK0793109.1 unnamed protein product [Polarella glacialis] diamond 159 44.7 1 Eukaryota Sar     Dinophyceae Suessiales Suessiaceae Polarella Polarella glacialis
31924917 31924917 PRJNA1240804_P_NODE_84797_length_183_cov_1.485075_g84431_i0 PRJNA1240804 84797 183 1.485075 2.71768725 Triparma 722752 SAR_Eukaryotes SAR_Eukaryotes 60.5 9.69e-9   NR GMI48786.1 722753 g84431 i0 62.1 1.90163934426229 58 20 91.8 2 168 1 788 845 GMI48786.1 hypothetical protein TrCOL_g10808 [Triparma columacea] diamond 348 60.5 1 Eukaryota Sar     Bolidophyceae Parmales Triparmaceae Triparma Triparma columacea
31956500 31956500 PRJNA1240804_P_NODE_139497_length_164_cov_0.904348_g139131_i0 PRJNA1240804 139497 164 0.904348 1.48313072 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 47.8 2.16e-4   NR XP_067815137.1 4779 g139131 i0 52 1.8109756097561 50 22 91.5 2 12 161 282 329 XP_067815137.1 hypothetical protein CCR75_004047 [Bremia lactucae] diamond 297 48.1 0.993762993762994 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
31969968 31969968 PRJNA1240804_P_NODE_110618_length_169_cov_0.866667_g110252_i0 PRJNA1240804 110618 169 0.866667 1.46466723 Nitzschia inconspicua 303405 SAR_Eukaryotes SAR_Eukaryotes 56.6 1.74e-7   NR KAG7366549.1 303405 g110252 i0 60.5 0.674556213017751 38 15 67.5 0 4 117 404 441 KAG7366549.1 hypothetical protein IV203_029219 [Nitzschia inconspicua] diamond 114 56.6 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua
32191709 32191709 PRJNA1240804_P_NODE_82338_length_185_cov_1.220588_g81972_i0 PRJNA1240804 82338 185 1.220588 2.2580878 Polarella glacialis 89957 SAR_Eukaryotes SAR_Eukaryotes 52 9.47e-6   NR CAK0833003.1 89957 g81972 i0 42.4 0.956756756756757 59 34 95.7 0 8 184 1396 1454 CAK0833003.1 unnamed protein product, partial [Polarella glacialis] diamond 177 52 1 Eukaryota Sar     Dinophyceae Suessiales Suessiaceae Polarella Polarella glacialis
32508179 32508179 PRJNA1240804_P_NODE_107999_length_169_cov_0.866667_g107633_i0 PRJNA1240804 107999 169 0.866667 1.46466723 Stentor coeruleus 5963 SAR_Eukaryotes SAR_Eukaryotes 45.4 0.00157   NR OMJ73795.1 5963 g107633 i0 75 1.13609467455621 28 7 49.7 0 49 132 594 621 OMJ73795.1 hypothetical protein SteCoe_27437 [Stentor coeruleus] diamond 192 45.4 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
32539806 32539806 PRJNA1240804_P_NODE_126739_length_166_cov_0.888889_g126373_i0 PRJNA1240804 126739 166 0.888889 1.47555574 Hyaloperonospora brassicae 162125 SAR_Eukaryotes SAR_Eukaryotes 108 1.19e-25   NR CAI5715846.1 162125 g126373 i0 94 0.903614457831325 50 3 90.4 0 16 165 464 513 CAI5715846.1 unnamed protein product [Hyaloperonospora brassicae] diamond 150 108 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora brassicae
32602700 32602700 PRJNA1240804_P_NODE_124540_length_166_cov_0.888889_g124174_i0 PRJNA1240804 124540 166 0.888889 1.47555574 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 60.1 9.96e-9   NR ETO25949.1 46433 g124174 i0 56 0.903614457831325 50 22 90.4 0 151 2 88 137 ETO25949.1 hypothetical protein RFI_11184 [Reticulomyxa filosa] diamond 150 60.1 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32665600 32665600 PRJNA1240804_P_NODE_42320_length_233_cov_0.994565_g41954_i0 PRJNA1240804 42320 233 0.994565 2.31733645 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 56.2 1.4e-7   NR KRX01081.1 266149 g41954 i0 55.8 0.669527896995708 52 23 67 0 209 54 26 77 KRX01081.1 hypothetical protein PPERSA_02177 [Pseudocohnilembus persalinus] diamond 156 56.2 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;