contig_metadata
40 rows where analysis = "diamond", bioproject = "PRJNA1237888" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7427732 | 7427732 | PRJNA1237888_S_NODE_7066_length_164_cov_0.904348_g7016_i0 | PRJNA1237888 | 7066 | 164 | 0.904348 | 1.48313072 | Niveispirillum irakense | 34011 | Bacteria | Bacteria | 119 | 8.28e-30 | NR | WP_281169955.1 | 34011 | g7016 | i0 | 96.3 | 0.98780487804878 | 54 | 2 | 98.8 | 0 | 162 | 1 | 403 | 456 | WP_281169955.1 4-alpha-glucanotransferase [Niveispirillum irakense] | diamond | 162 | 119 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Azospirillaceae | Niveispirillum | Niveispirillum irakense | ||
| 10550728 | 10550728 | PRJNA1237888_S_NODE_6589_length_166_cov_0.888889_g6539_i0 | PRJNA1237888 | 6589 | 166 | 0.888889 | 1.47555574 | Escherichia coli | 562 | Bacteria | Bacteria | 102 | 1.54e-25 | NR | WP_201294109.1 | 562 | g6539 | i0 | 98.2 | 2.98192771084337 | 55 | 1 | 99.4 | 0 | 165 | 1 | 85 | 139 | WP_201294109.1 hypothetical protein, partial [Escherichia coli] | diamond | 495 | 102 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 20748186 | 20748186 | PRJNA1237888_S_NODE_6797_length_165_cov_0.896552_g6747_i0 | PRJNA1237888 | 6797 | 165 | 0.896552 | 1.4793108 | Acetobacterales | 3120395 | Bacteria | Bacteria | 100 | 3.22e-23 | NR | WP_290315044.1 | 373043 | g6747 | i0 | 87 | 2.92727272727273 | 54 | 7 | 98.2 | 0 | 164 | 3 | 187 | 240 | WP_290315044.1 phospholipase D-like domain-containing protein [Paeniroseomonas aquatica] | diamond | 483 | 100 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Acetobacterales | Acetobacteraceae | Paeniroseomonas | Paeniroseomonas aquatica | ||
| 21451658 | 21451658 | PRJNA1237888_S_NODE_7057_length_164_cov_0.904348_g7007_i0 | PRJNA1237888 | 7057 | 164 | 0.904348 | 1.48313072 | Rhizobium anhuiense | 1184720 | Bacteria | Bacteria | 102 | 8.09e-24 | NR | WP_097622665.1 | 1184720 | g7007 | i0 | 98.1 | 1.97560975609756 | 54 | 1 | 98.8 | 0 | 163 | 2 | 185 | 238 | WP_097622665.1 NAD-dependent succinate-semialdehyde dehydrogenase [Rhizobium anhuiense] | diamond | 324 | 102 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Rhizobium | Rhizobium anhuiense | ||
| 26693523 | 26693523 | PRJNA1237888_S_NODE_6021_length_169_cov_1.300000_g5971_i0 | PRJNA1237888 | 6021 | 169 | 1.3 | 2.197 | Pseudomonas aeruginosa | 287 | Bacteria | Bacteria | 50.4 | 1.79e-6 | NR | MEX7103009.1 | 287 | g5971 | i0 | 87.5 | 0.568047337278107 | 32 | 4 | 56.8 | 0 | 163 | 68 | 2 | 33 | MEX7103009.1 hypothetical protein [Pseudomonas aeruginosa] | diamond | 96 | 50.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 26852168 | 26852168 | PRJNA1237888_S_NODE_2121_length_279_cov_20.604348_g2071_i0 | PRJNA1237888 | 2121 | 279 | 20.604348 | 57.48613092 | Klebsiella pneumoniae | 573 | Bacteria | Bacteria | 132 | 2.07e-37 | NR | KAB1706112.1 | 573 | g2071 | i0 | 94.4 | 12.9784946236559 | 71 | 4 | 76.3 | 0 | 277 | 65 | 57 | 127 | KAB1706112.1 hypothetical protein FNE63_30530 [Klebsiella pneumoniae] | diamond | 3621 | 133 | 0.992481203007519 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 26978493 | 26978493 | PRJNA1237888_S_NODE_6422_length_167_cov_0.881356_g6372_i0 | PRJNA1237888 | 6422 | 167 | 0.881356 | 1.47186452 | Gammaproteobacteria bacterium | 1913989 | Bacteria | Bacteria | 113 | 2.0900000000000003e-27 | NR | MBU0790348.1 | 1913989 | g6372 | i0 | 98.2 | 0.988023952095808 | 55 | 1 | 98.8 | 0 | 1 | 165 | 1047 | 1101 | MBU0790348.1 hypothetical protein [Gammaproteobacteria bacterium] | diamond | 165 | 113 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Gammaproteobacteria bacterium | |||||
| 26978494 | 26978494 | PRJNA1237888_S_NODE_7022_length_164_cov_0.904348_g6972_i0 | PRJNA1237888 | 7022 | 164 | 0.904348 | 1.48313072 | Oceanibaculum pacificum | 580166 | Bacteria | Bacteria | 92.8 | 2.39e-20 | NR | WP_067553428.1 | 580166 | g6972 | i0 | 97.7 | 0.786585365853659 | 43 | 1 | 78.7 | 0 | 3 | 131 | 432 | 474 | WP_067553428.1 ribosome biogenesis GTPase Der [Oceanibaculum pacificum] | diamond | 129 | 92.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Oceanibaculaceae | Oceanibaculum | Oceanibaculum pacificum | ||
| 26996583 | 26996583 | PRJNA1237888_S_NODE_7302_length_163_cov_0.877193_g7252_i0 | PRJNA1237888 | 7302 | 163 | 0.877193 | 1.42982459 | Sphingomonas | 13687 | Bacteria | Bacteria | 57.4 | 6.12e-8 | NR | WP_010405459.1 | 59803 | g7252 | i0 | 84.4 | 1.17791411042945 | 32 | 5 | 58.9 | 0 | 1 | 96 | 222 | 253 | WP_010405459.1 TIGR02186 family protein [Sphingomonas echinoides] | diamond | 192 | 57.8 | 0.993079584775087 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas echinoides | ||
| 27073399 | 27073399 | PRJNA1237888_S_NODE_5382_length_178_cov_1.666667_g5332_i0 | PRJNA1237888 | 5382 | 178 | 1.666667 | 2.96666726 | Vibrio vulnificus | 672 | Bacteria | Bacteria | 64.7 | 4.48e-12 | NR | WP_224657775.1 | 672 | g5332 | i0 | 82.5 | 0.674157303370786 | 40 | 7 | 67.4 | 0 | 58 | 177 | 3 | 42 | WP_224657775.1 hypothetical protein, partial [Vibrio vulnificus] | diamond | 120 | 64.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio vulnificus | ||
| 27136221 | 27136221 | PRJNA1237888_S_NODE_7142_length_163_cov_1.824561_g7092_i0 | PRJNA1237888 | 7142 | 163 | 1.824561 | 2.97403443 | Enterobacter hormaechei | 158836 | Bacteria | Bacteria | 100 | 5.62e-25 | NR | WP_149385483.1 | 158836 | g7092 | i0 | 98.1 | 54.6257668711656 | 53 | 1 | 97.5 | 0 | 162 | 4 | 70 | 122 | WP_149385483.1 hypothetical protein, partial [Enterobacter hormaechei] | diamond | 8904 | 101 | 0.99009900990099 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Enterobacter | Enterobacter hormaechei | ||
| 27610623 | 27610623 | PRJNA1237888_S_NODE_7544_length_160_cov_3.261261_g7494_i0 | PRJNA1237888 | 7544 | 160 | 3.261261 | 5.2180176 | Enterobacter hormaechei | 158836 | Bacteria | Bacteria | 108 | 5.409999999999999e-28 | NR | RAM39527.1 | 158836 | g7494 | i0 | 98.1 | 43.70625 | 53 | 1 | 99.4 | 0 | 2 | 160 | 89 | 141 | RAM39527.1 elongation factor EF-2, partial [Enterobacter hormaechei] | diamond | 6993 | 109 | 0.990825688073395 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Enterobacter | Enterobacter hormaechei | ||
| 27818374 | 27818374 | PRJNA1237888_S_NODE_4184_length_201_cov_0.888158_g4134_i0 | PRJNA1237888 | 4184 | 201 | 0.888158 | 1.78519758 | root | 1 | Root_unresolved | Root_unresolved | 126 | 3.2799999999999996e-35 | NR | WP_175283833.1 | 562 | g4134 | i0 | 97 | 301.432835820896 | 66 | 2 | 98.5 | 0 | 200 | 3 | 78 | 143 | WP_175283833.1 Hsp70 family protein, partial [Escherichia coli] | diamond | 60588 | 127 | 0.992125984251969 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 28052502 | 28052502 | PRJNA1237888_S_NODE_7865_length_152_cov_3.349515_g7815_i0 | PRJNA1237888 | 7865 | 152 | 3.349515 | 5.0912628 | Klebsiella pneumoniae | 573 | Bacteria | Bacteria | 101 | 3.3400000000000003e-26 | NR | WP_201283003.1 | 573 | g7815 | i0 | 96 | 19.7171052631579 | 50 | 2 | 98.7 | 0 | 2 | 151 | 5 | 54 | WP_201283003.1 ferritin family protein, partial [Klebsiella pneumoniae] | diamond | 2997 | 101 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 28196917 | 28196917 | PRJNA1237888_S_NODE_3086_length_230_cov_6.646409_g3036_i0 | PRJNA1237888 | 3086 | 230 | 6.646409 | 15.2867407 | root | 1 | Root_unresolved | Root_unresolved | 150 | 1.51e-44 | NR | WP_176265472.1 | 562 | g3036 | i0 | 100 | 28.7347826086957 | 76 | 0 | 99.1 | 0 | 230 | 3 | 5 | 80 | WP_176265472.1 30S ribosomal protein S15, partial [Escherichia coli] | diamond | 6609 | 150 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 28386466 | 28386466 | PRJNA1237888_S_NODE_3686_length_212_cov_1.613497_g3636_i0 | PRJNA1237888 | 3686 | 212 | 1.613497 | 3.42061364 | root | 1 | Root_unresolved | Root_unresolved | 137 | 3.0899999999999998e-40 | NR | WP_353839214.1 | 470 | g3636 | i0 | 95.7 | 50.5188679245283 | 70 | 3 | 99.1 | 0 | 210 | 1 | 22 | 91 | WP_353839214.1 50S ribosomal protein L19e, partial [Acinetobacter baumannii] | diamond | 10710 | 138 | 0.992753623188406 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter baumannii | ||
| 28449836 | 28449836 | PRJNA1237888_S_NODE_6586_length_166_cov_0.888889_g6536_i0 | PRJNA1237888 | 6586 | 166 | 0.888889 | 1.47555574 | Nevskia | 64001 | Bacteria | Bacteria | 114 | 1.07e-27 | NR | WP_295687226.1 | 228950 | g6536 | i0 | 94.4 | 2.92771084337349 | 54 | 3 | 97.6 | 0 | 3 | 164 | 535 | 588 | WP_295687226.1 methylmalonyl-CoA mutase family protein, partial [uncultured Nevskia sp.] | diamond | 486 | 114 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Nevskiales | Nevskiaceae | Nevskia | uncultured Nevskia sp. | ||
| 28526364 | 28526364 | PRJNA1237888_S_NODE_5227_length_180_cov_2.770992_g5177_i0 | PRJNA1237888 | 5227 | 180 | 2.770992 | 4.9877856 | Sphingomonas | 13687 | Bacteria | Bacteria | 103 | 5.690000000000001e-27 | NR | WP_010403983.1 | 13687 | g5177 | i0 | 100 | 0.916666666666667 | 55 | 0 | 91.7 | 0 | 16 | 180 | 1 | 55 | WP_010403983.1 MULTISPECIES: hypothetical protein [Sphingomonas] | diamond | 165 | 103 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | |||
| 28589475 | 28589475 | PRJNA1237888_S_NODE_6847_length_165_cov_0.896552_g6797_i0 | PRJNA1237888 | 6847 | 165 | 0.896552 | 1.4793108 | Sphingopyxis yananensis | 2886687 | Bacteria | Bacteria | 100 | 3.439999999999999e-23 | NR | WP_227688258.1 | 2886687 | g6797 | i0 | 96.3 | 0.981818181818182 | 54 | 2 | 98.2 | 0 | 2 | 163 | 132 | 185 | WP_227688258.1 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Sphingopyxis yananensis] | diamond | 162 | 100 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingopyxis | Sphingopyxis yananensis | ||
| 28796773 | 28796773 | PRJNA1237888_S_NODE_6467_length_167_cov_0.881356_g6417_i0 | PRJNA1237888 | 6467 | 167 | 0.881356 | 1.47186452 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 81.3 | 3.55e-17 | NR | HYZ23595.1 | 2480087 | g6417 | i0 | 64 | 3.59281437125748 | 50 | 18 | 89.8 | 0 | 2 | 151 | 87 | 136 | HYZ23595.1 hypothetical protein [Rhodopila sp.] | diamond | 600 | 81.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Acetobacterales | Acetobacteraceae | Rhodopila | Rhodopila sp. | ||
| 29049701 | 29049701 | PRJNA1237888_S_NODE_1688_length_318_cov_3.646840_g1638_i0 | PRJNA1237888 | 1688 | 318 | 3.64684 | 11.5969512 | root | 1 | Root_unresolved | Root_unresolved | 218 | 1.44e-70 | NR | MDC9991623.1 | 623 | g1638 | i0 | 97.1 | 48.5094339622642 | 105 | 3 | 99.1 | 0 | 316 | 2 | 48 | 152 | MDC9991623.1 hypothetical protein [Shigella flexneri] | diamond | 15426 | 220 | 0.990909090909091 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Shigella | Shigella flexneri | ||
| 29189377 | 29189377 | PRJNA1237888_S_NODE_7909_length_151_cov_4.107843_g7859_i0 | PRJNA1237888 | 7909 | 151 | 4.107843 | 6.20284293 | Colwellia ponticola | 2304625 | Bacteria | Bacteria | 41.6 | 0.0278 | NR | WP_138620754.1 | 2304625 | g7859 | i0 | 48.7 | 0.774834437086093 | 39 | 19 | 77.5 | 1 | 1 | 117 | 182 | 219 | WP_138620754.1 EAL domain-containing protein [Colwellia ponticola] | diamond | 117 | 41.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Alteromonadales | Colwelliaceae | Colwellia | Colwellia ponticola | ||
| 29599421 | 29599421 | PRJNA1237888_S_NODE_6670_length_166_cov_0.888889_g6620_i0 | PRJNA1237888 | 6670 | 166 | 0.888889 | 1.47555574 | uncultured Thiocystis sp. | 1202134 | Bacteria | Bacteria | 87.8 | 1.63e-18 | NR | WP_295399831.1 | 1202134 | g6620 | i0 | 78.8 | 1.91566265060241 | 52 | 11 | 94 | 0 | 164 | 9 | 155 | 206 | WP_295399831.1 exonuclease domain-containing protein [uncultured Thiocystis sp.] | diamond | 318 | 87.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Chromatiales | Chromatiaceae | Thiocystis | uncultured Thiocystis sp. | ||
| 29649086 | 29649086 | PRJNA1237888_S_NODE_2350_length_265_cov_2.393519_g2300_i0 | PRJNA1237888 | 2350 | 265 | 2.393519 | 6.34282535 | root | 1 | Root_unresolved | Root_unresolved | 92.8 | 1.26e-22 | NR | MCV4820350.1 | 562 | g2300 | i0 | 97.7 | 32.377358490566 | 44 | 1 | 49.8 | 0 | 1 | 132 | 30 | 73 | MCV4820350.1 NADH-quinone oxidoreductase subunit D [Escherichia coli] | diamond | 8580 | 93.2 | 0.995708154506438 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 29712244 | 29712244 | PRJNA1237888_S_NODE_7370_length_162_cov_1.380531_g7320_i0 | PRJNA1237888 | 7370 | 162 | 1.380531 | 2.23646022 | Bradyrhizobium | 374 | Bacteria | Bacteria | 75.1 | 4.72e-14 | NR | WP_024584873.1 | 1297865 | g7320 | i0 | 95.1 | 1.51851851851852 | 41 | 2 | 75.9 | 0 | 39 | 161 | 1 | 41 | WP_024584873.1 ParB N-terminal domain-containing protein [Bradyrhizobium sp. OHSU_III] | diamond | 246 | 75.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. OHSU_III | ||
| 29870508 | 29870508 | PRJNA1237888_S_NODE_3031_length_232_cov_19.273224_g2981_i0 | PRJNA1237888 | 3031 | 232 | 19.273224 | 44.71387968 | root | 1 | Root_unresolved | Root_unresolved | 130 | 2.3e-37 | NR | WP_353960168.1 | 573 | g2981 | i0 | 100 | 49.6939655172414 | 63 | 0 | 81.5 | 0 | 231 | 43 | 54 | 116 | WP_353960168.1 50S ribosomal protein L14 [Klebsiella pneumoniae] | diamond | 11529 | 130 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 30199588 | 30199588 | PRJNA1237888_S_NODE_7592_length_158_cov_61.394495_g7542_i0 | PRJNA1237888 | 7592 | 158 | 61.394495 | 97.0033021 | Klebsiella pneumoniae | 573 | Bacteria | Bacteria | 114 | 6.919999999999999e-31 | NR | WP_416532323.1 | 573 | g7542 | i0 | 100 | 0.987341772151899 | 52 | 0 | 98.7 | 0 | 156 | 1 | 95 | 146 | WP_416532323.1 hypothetical protein, partial [Klebsiella pneumoniae] | diamond | 156 | 114 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 30295009 | 30295009 | PRJNA1237888_S_NODE_7072_length_164_cov_0.904348_g7022_i0 | PRJNA1237888 | 7072 | 164 | 0.904348 | 1.48313072 | Methylobacterium sp. yr668 | 1761801 | Bacteria | Bacteria | 108 | 7.24e-26 | NR | WP_175556430.1 | 1761801 | g7022 | i0 | 94.4 | 0.98780487804878 | 54 | 3 | 98.8 | 0 | 164 | 3 | 163 | 216 | WP_175556430.1 sensor histidine kinase [Methylobacterium sp. yr668] | diamond | 162 | 108 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium sp. yr668 | ||
| 30439386 | 30439386 | PRJNA1237888_S_NODE_4613_length_191_cov_3.471831_g4563_i0 | PRJNA1237888 | 4613 | 191 | 3.471831 | 6.63119721 | root | 1 | Root_unresolved | Root_unresolved | 72.8 | 3.08e-15 | NR | WP_409448015.1 | 562 | g4563 | i0 | 100 | 33.6753926701571 | 32 | 0 | 50.3 | 0 | 2 | 97 | 33 | 64 | WP_409448015.1 hypothetical protein [Escherichia coli] | diamond | 6432 | 72.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 30452817 | 30452817 | PRJNA1237888_S_NODE_3133_length_229_cov_0.894444_g3083_i0 | PRJNA1237888 | 3133 | 229 | 0.894444 | 2.04827676 | Rhodanobacteraceae bacterium JHOS43 | 2996032 | Bacteria | Bacteria | 149 | 1.57e-44 | NR | MCX7557812.1 | 2996032 | g3083 | i0 | 100 | 18.9039301310044 | 72 | 0 | 94.3 | 0 | 3 | 218 | 27 | 98 | MCX7557812.1 fructose-bisphosphate aldolase [Rhodanobacteraceae bacterium JHOS43] | diamond | 4329 | 149 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Rhodanobacteraceae | Rhodanobacteraceae bacterium JHOS43 | |||
| 30628562 | 30628562 | PRJNA1237888_S_NODE_3833_length_208_cov_5.264151_g3783_i0 | PRJNA1237888 | 3833 | 208 | 5.264151 | 10.94943408 | root | 1 | Root_unresolved | Root_unresolved | 130 | 1.4e-37 | NR | WP_170832345.1 | 470 | g3783 | i0 | 100 | 79.6153846153846 | 69 | 0 | 99.5 | 0 | 2 | 208 | 6 | 74 | WP_170832345.1 KH domain-containing protein, partial [Acinetobacter baumannii] | diamond | 16560 | 130 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter baumannii | ||
| 30642000 | 30642000 | PRJNA1237888_S_NODE_6613_length_166_cov_0.888889_g6563_i0 | PRJNA1237888 | 6613 | 166 | 0.888889 | 1.47555574 | Reyranella sp. | 1929291 | Bacteria | Bacteria | 109 | 3.18e-27 | NR | WP_395709959.1 | 1929291 | g6563 | i0 | 90.9 | 0.993975903614458 | 55 | 5 | 99.4 | 0 | 165 | 1 | 252 | 306 | WP_395709959.1 zinc-binding alcohol dehydrogenase family protein [Reyranella sp.] | diamond | 165 | 109 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Reyranellaceae | Reyranella | Reyranella sp. | ||
| 30831669 | 30831669 | PRJNA1237888_S_NODE_3754_length_210_cov_2.745342_g3704_i0 | PRJNA1237888 | 3754 | 210 | 2.745342 | 5.7652182 | Klebsiella pneumoniae | 573 | Bacteria | Bacteria | 102 | 1.09e-26 | NR | MEV9163250.1 | 573 | g3704 | i0 | 96.8 | 0.9 | 63 | 2 | 90 | 0 | 3 | 191 | 5 | 67 | MEV9163250.1 hypothetical protein [Klebsiella pneumoniae] | diamond | 189 | 102 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 31084531 | 31084531 | PRJNA1237888_S_NODE_1515_length_334_cov_7.708772_g1465_i0 | PRJNA1237888 | 1515 | 334 | 7.708772 | 25.74729848 | Hafnia paralvei | 546367 | Bacteria | Bacteria | 124 | 4.38e-32 | NR | WP_256000131.1 | 546367 | g1465 | i0 | 94 | 1.20359281437126 | 67 | 4 | 60.2 | 0 | 333 | 133 | 234 | 300 | WP_256000131.1 class I fructose-bisphosphate aldolase, partial [Hafnia paralvei] | diamond | 402 | 125 | 0.992 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Hafniaceae | Hafnia | Hafnia paralvei | ||
| 31165604 | 31165604 | PRJNA1237888_S_NODE_5275_length_179_cov_13.161538_g5225_i0 | PRJNA1237888 | 5275 | 179 | 13.161538 | 23.55915302 | root | 1 | Root_unresolved | Root_unresolved | 53.9 | 1.48e-7 | NR | WP_353802596.1 | 470 | g5225 | i0 | 100 | 67.4413407821229 | 23 | 0 | 38.5 | 0 | 1 | 69 | 70 | 92 | WP_353802596.1 30S ribosomal protein S30e, partial [Acinetobacter baumannii] | diamond | 12072 | 53.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter baumannii | ||
| 31305688 | 31305688 | PRJNA1237888_S_NODE_475_length_557_cov_55.887795_g429_i0 | PRJNA1237888 | 475 | 557 | 55.887795 | 311.29501815 | Klebsiella pneumoniae | 573 | Bacteria | Bacteria | 115 | 3.1000000000000003e-30 | NR | WP_289465480.1 | 573 | g429 | i0 | 95 | 0.646319569120287 | 60 | 3 | 32.3 | 0 | 554 | 375 | 2 | 61 | WP_289465480.1 class I fructose-bisphosphate aldolase, partial [Klebsiella pneumoniae] | diamond | 360 | 115 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 31956485 | 31956485 | PRJNA1237888_S_NODE_3497_length_217_cov_8.202381_g3447_i0 | PRJNA1237888 | 3497 | 217 | 8.202381 | 17.79916677 | root | 1 | Root_unresolved | Root_unresolved | 149 | 6.95e-45 | NR | WP_224642557.1 | 672 | g3447 | i0 | 100 | 25.3824884792627 | 68 | 0 | 94 | 0 | 216 | 13 | 52 | 119 | WP_224642557.1 ubiquitin-40S ribosomal protein S27a family protein, partial [Vibrio vulnificus] | diamond | 5508 | 149 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio vulnificus | ||
| 31969953 | 31969953 | PRJNA1237888_S_NODE_6078_length_169_cov_0.866667_g6028_i0 | PRJNA1237888 | 6078 | 169 | 0.866667 | 1.46466723 | Sphingomonas | 13687 | Bacteria | Bacteria | 93.2 | 2e-21 | NR | WP_010406105.1 | 13687 | g6028 | i0 | 100 | 0.940828402366864 | 53 | 0 | 94.1 | 0 | 159 | 1 | 1 | 53 | WP_010406105.1 MULTISPECIES: class I SAM-dependent methyltransferase [Sphingomonas] | diamond | 159 | 93.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | |||
| 32255143 | 32255143 | PRJNA1237888_S_NODE_6398_length_167_cov_1.093220_g6348_i0 | PRJNA1237888 | 6398 | 167 | 1.09322 | 1.8256774 | Bradyrhizobium sp. | 376 | Bacteria | Bacteria | 48.1 | 7.5e-6 | NR | MFO1108767.1 | 376 | g6348 | i0 | 91.7 | 0.862275449101796 | 24 | 2 | 43.1 | 0 | 2 | 73 | 17 | 40 | MFO1108767.1 hypothetical protein [Bradyrhizobium sp.] | diamond | 144 | 48.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. | ||
| 32508173 | 32508173 | PRJNA1237888_S_NODE_6459_length_167_cov_0.881356_g6409_i0 | PRJNA1237888 | 6459 | 167 | 0.881356 | 1.47186452 | Sphingomonas sp. 66-1 | 28214 | Bacteria | Bacteria | 102 | 2.43e-26 | NR | WP_286774445.1 | 1895848 | g6409 | i0 | 100 | 0.970059880239521 | 54 | 0 | 97 | 0 | 165 | 4 | 76 | 129 | WP_286774445.1 DUF1761 family protein [Sphingomonas sp. 66-10] | diamond | 162 | 102 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. 66-10 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;