RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1237347" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1237347 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27578695 27578695 PRJNA1237347_P_NODE_443624_length_262_cov_1.074074_g437051_i0 PRJNA1237347 443624 262 1.074074 2.81407388 Gammapartitivirus sp. 2809420 Viruses Viruses 68.2 5.02e-11   NR XCO48158.1 2809420 g437051 i0 39.5 1.96946564885496 86 50 96.2 1 254 3 141 226 XCO48158.1 MAG: putative replicase [Gammapartitivirus sp.] diamond 516 68.2 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae Gammapartitivirus Gammapartitivirus sp.
27610071 27610071 PRJNA1237347_P_NODE_185284_length_456_cov_1.527415_g178713_i0 PRJNA1237347 185284 456 1.527415 6.9650124 Hebei betayadokarivirus 3372915 Viruses Viruses 84.3 1.2e-15   NR XHZ00044.1 3372915 g178713 i0 30.3 0.934210526315789 142 99 93.4 0 31 456 689 830 XHZ00044.1 MAG: RNA-dependent RNA polymerase [Hebei betayadokarivirus] diamond 426 84.3 1 Viruses   Orthornavirae Pisuviricota   Yadokarivirales Yadokariviridae Betayadokarivirus Hebei betayadokarivirus
29536089 29536089 PRJNA1237347_P_NODE_25630_length_1550_cov_673.774543_g22493_i0 PRJNA1237347 25630 1550 673.774543 10443.5054165 Inari deltapartitivirus 2970719 Viruses Viruses 235 2.64e-67   NR UUV42371.1 2970719 g22493 i0 35.5 2.53161290322581 425 252 78.2 7 1355 144 37 460 UUV42371.1 MAG: putative RNA dependent RNA polymerase [Inari deltapartitivirus] diamond 3924 235 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae Deltapartitivirus Inari deltapartitivirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;