RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA1237347" and tax_phylum = "Orthonectida"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Orthonectida · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1237347 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26996466 26996466 PRJNA1237347_P_NODE_220882_length_406_cov_1.522523_g214310_i0 PRJNA1237347 220882 406 1.522523 6.18144338 root 1 Root_unresolved Root_unresolved 76.6 3.25e-13   NR OAF69429.1 1819745 g214310 i0 51.3 3.13300492610837 76 37 56.2 0 365 138 388 463 OAF69429.1 hypothetical protein A3Q56_02829 [Intoshia linei] diamond 1272 77 0.994805194805195 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei
28146811 28146811 PRJNA1237347_P_NODE_110585_length_639_cov_1.318021_g104113_i0 PRJNA1237347 110585 639 1.318021 8.42215419 Intoshia linei 1819745 Orthonectida other_Eukaryota 53.9 2.01e-4   NR OAF70026.1 1819745 g104113 i0 35.9 1.75586854460094 78 46 36.6 1 1 234 899 972 OAF70026.1 hypothetical protein A3Q56_02216, partial [Intoshia linei] diamond 1122 53.9 1 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei
28683940 28683940 PRJNA1237347_P_NODE_379267_length_288_cov_2.227907_g372694_i0 PRJNA1237347 379267 288 2.227907 6.41637216 Intoshia linei 1819745 Orthonectida other_Eukaryota 66.2 2.8e-10   NR OAF71136.1 1819745 g372694 i0 43 1.65625 86 46 87.5 2 261 10 182 266 OAF71136.1 hypothetical protein A3Q56_01093 [Intoshia linei] diamond 477 66.2 1 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei
29126315 29126315 PRJNA1237347_P_NODE_73389_length_831_cov_1.757256_g67484_i0 PRJNA1237347 73389 831 1.757256 14.60279736 Intoshia linei 1819745 Orthonectida other_Eukaryota 87.4 2.45e-15   NR OAF69296.1 1819745 g67484 i0 32.3 0.725631768953069 201 118 69.3 5 14 589 172 363 OAF69296.1 hypothetical protein A3Q56_02971 [Intoshia linei] diamond 603 87.4 1 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei
29820111 29820111 PRJNA1237347_P_NODE_322571_length_319_cov_1.565041_g315998_i0 PRJNA1237347 322571 319 1.565041 4.99248079 Intoshia linei 1819745 Orthonectida other_Eukaryota 45.8 0.00723   NR OAF67154.1 1819745 g315998 i0 46 0.592476489028213 63 27 55.5 2 317 141 609 668 OAF67154.1 hypothetical protein A3Q56_05126 [Intoshia linei] diamond 189 45.8 1 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei
30294412 30294412 PRJNA1237347_P_NODE_165512_length_491_cov_2.437799_g158948_i0 PRJNA1237347 165512 491 2.437799 11.96959309 Intoshia linei 1819745 Orthonectida other_Eukaryota 62 1.04e-7   NR OAF70112.1 1819745 g158948 i0 30.2 0.769857433808554 126 84 76.4 3 105 479 1811 1933 OAF70112.1 DnaJ subfamily C member 13 [Intoshia linei] diamond 378 62 1 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei
30483949 30483949 PRJNA1237347_P_NODE_371933_length_292_cov_1.054795_g365360_i0 PRJNA1237347 371933 292 1.054795 3.0800014 Intoshia linei 1819745 Orthonectida other_Eukaryota 55.8 1.68e-6   NR OAF67331.1 1819745 g365360 i0 31 1.02739726027397 100 61 94.5 2 5 280 608 707 OAF67331.1 Epithelial cell-transforming sequence 2 oncogene [Intoshia linei] diamond 300 55.8 1 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei
30957808 30957808 PRJNA1237347_P_NODE_242994_length_381_cov_2.237013_g236421_i0 PRJNA1237347 242994 381 2.237013 8.52301953 Intoshia linei 1819745 Orthonectida other_Eukaryota 92 1.08e-18   NR OAF70026.1 1819745 g236421 i0 50.6 7.03937007874016 89 40 70.1 2 112 378 1474 1558 OAF70026.1 hypothetical protein A3Q56_02216, partial [Intoshia linei] diamond 2682 92 1 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei
31621610 31621610 PRJNA1237347_P_NODE_320676_length_320_cov_1.902834_g314103_i0 PRJNA1237347 320676 320 1.902834 6.0890688 Intoshia linei 1819745 Orthonectida other_Eukaryota 57 8.63e-7   NR OAF69446.1 1819745 g314103 i0 32.5 1.415625 83 56 77.8 0 265 17 188 270 OAF69446.1 RCC1-like G exchanging factor-like protein [Intoshia linei] diamond 453 57 1 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;