RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA1237347" and tax_phylum = "Candidatus Wirthbacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Wirthbacteria · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA1237347 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31273773 31273773 PRJNA1237347_P_NODE_347535_length_304_cov_2.818182_g340962_i0 PRJNA1237347 347535 304 2.818182 8.56727328 Candidatus Wirthbacteria bacterium CG2_3 2268191 Bacteria Bacteria 117 1.43e-28   NR OIP95211.1 1817892 g340962 i0 52 2.96052631578947 100 47 98.7 1 303 4 125 223 OIP95211.1 MAG: hypothetical protein AUK40_06245 [Candidatus Wirthbacteria bacterium CG2_30_54_11] diamond 900 117 1 Bacteria Bacteria candidate phyla   Candidatus Wirthbacteria         Candidatus Wirthbacteria bacterium CG2_30_54_11

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;