RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1237347" and tax_phylum = "Candidatus Walliibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Walliibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1237347 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28336723 28336723 PRJNA1237347_P_NODE_93386_length_712_cov_1.935837_g87083_i0 PRJNA1237347 93386 712 1.935837 13.78315944 Candidatus Wallbacteria bacterium 2053640 Bacteria Bacteria 162 2.51e-43   NR MBI4869439.1 2053640 g87083 i0 54.5 4.3061797752809 145 62 59.4 1 693 271 36 180 MBI4869439.1 CHAP domain-containing protein [Candidatus Wallbacteria bacterium] diamond 3066 162 1 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium
28765230 28765230 PRJNA1237347_P_NODE_399847_length_279_cov_10.776699_g393274_i0 PRJNA1237347 399847 279 10.776699 30.06699021 Bacteria 2 Bacteria Bacteria 48.1 7.68e-4   NR MBI3892509.1 2053640 g393274 i0 39 1.61290322580645 82 44 87.1 3 4 246 611 687 MBI3892509.1 hypothetical protein [Candidatus Wallbacteria bacterium] diamond 450 48.5 0.991752577319588 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium
32317834 32317834 PRJNA1237347_P_NODE_177799_length_469_cov_0.972222_g171228_i0 PRJNA1237347 177799 469 0.972222 4.55972118 Candidatus Wallbacteria bacterium 2053640 Bacteria Bacteria 65.9 3.45e-9   NR HPG58547.1 2053640 g171228 i0 29 2.37953091684435 124 87 78.7 1 93 461 181 304 HPG58547.1 NAD-glutamate dehydrogenase [Candidatus Wallbacteria bacterium] diamond 1116 65.9 1 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;