RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA1237347" and tax_phylum = "Candidatus Rifleibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rifleibacteriota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1237347 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28462964 28462964 PRJNA1237347_P_NODE_403946_length_278_cov_1.243902_g397373_i0 PRJNA1237347 403946 278 1.243902 3.45804756 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 44.3 0.00545   NR MBR4329900.1 2053586 g397373 i0 50 0.388489208633094 36 18 38.8 0 276 169 33 68 MBR4329900.1 ankyrin repeat domain-containing protein [Candidatus Rifleibacteriota bacterium] diamond 108 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
28809767 28809767 PRJNA1237347_P_NODE_440048_length_263_cov_1.615789_g433475_i0 PRJNA1237347 440048 263 1.615789 4.24952507 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 72.4 1.76e-12   NR MBF0409313.1 2053586 g433475 i0 41.7 3.75285171102662 84 48 95.8 1 9 260 1039 1121 MBF0409313.1 carboxypeptidase regulatory-like domain-containing protein [Candidatus Rifleibacteriota bacterium] diamond 987 72.4 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
30565185 30565185 PRJNA1237347_P_NODE_446473_length_260_cov_2.834225_g439900_i0 PRJNA1237347 446473 260 2.834225 7.368985 Bacteria 2 Bacteria Bacteria 110 8.55e-26   NR MBF0543679.1 2053586 g439900 i0 59.3 2.97692307692308 86 35 99.2 0 258 1 148 233 MBF0543679.1 hypothetical protein [Candidatus Rifleibacteriota bacterium] diamond 774 111 0.990990990990991 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
30926681 30926681 PRJNA1237347_P_NODE_73534_length_830_cov_1.562748_g67628_i0 PRJNA1237347 73534 830 1.562748 12.9708084 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 72 4.43e-10   NR NLF97513.1 2053586 g67628 i0 27.2 1.46746987951807 213 147 75.9 5 749 120 225 432 NLF97513.1 VWA domain-containing protein [Candidatus Rifleibacteriota bacterium] diamond 1218 72 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
31241868 31241868 PRJNA1237347_P_NODE_225355_length_401_cov_1.173780_g218783_i0 PRJNA1237347 225355 401 1.17378 4.7068578 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 75.1 1.06e-12   NR MFC1744698.1 2053586 g218783 i0 73.6 1.1072319201995 53 12 38.2 1 7 159 468 520 MFC1744698.1 ELWxxDGT repeat protein [Candidatus Rifleibacteriota bacterium] diamond 444 75.1 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
32444626 32444626 PRJNA1237347_P_NODE_392219_length_283_cov_1.261905_g385646_i0 PRJNA1237347 392219 283 1.261905 3.57119115 Candidatus Rifleibacterium sp. 3022866 Bacteria Bacteria 53.1 1.29e-5   NR HNX78115.1 3022866 g385646 i0 40.9 0.69964664310954106 66 39 70 0 50 247 64 129 HNX78115.1 ankyrin repeat domain-containing protein [Candidatus Rifleibacterium sp.] diamond 198 53.1 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota       Candidatus Rifleibacterium Candidatus Rifleibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;