RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1237347" and tax_phylum = "Candidatus Kaiseribacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kaiseribacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1237347 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27515545 27515545 PRJNA1237347_P_NODE_385783_length_286_cov_1.046948_g379210_i0 PRJNA1237347 385783 286 1.046948 2.99427128 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 117 5.73e-29   NR MSU73938.1 2030810 g379210 i0 58.7 5.79020979020979 92 37 96.5 1 3 278 283 373 MSU73938.1 NADP-dependent malic enzyme [Candidatus Kaiserbacteria bacterium] diamond 1656 117 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium
27673253 27673253 PRJNA1237347_P_NODE_154724_length_513_cov_2.456818_g148167_i0 PRJNA1237347 154724 513 2.456818 12.60347634 Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_ 2030810 Bacteria Bacteria 112 2.24e-25   NR OGG75602.1 1798514 g148167 i0 46 1.32163742690058 137 66 78.4 2 1 402 192 323 OGG75602.1 MAG: hypothetical protein A3A41_00590 [Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_01_FULL_54_22] diamond 678 112 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_01_FULL_54_22
32001058 32001058 PRJNA1237347_P_NODE_154178_length_514_cov_3.405896_g147622_i0 PRJNA1237347 154178 514 3.405896 17.50630544 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 249 4.14e-82   NR MCA9365925.1 2030810 g147622 i0 96 0.723735408560311 124 5 72.4 0 141 512 1 124 MCA9365925.1 FAD-binding protein [Candidatus Kaiserbacteria bacterium] diamond 372 249 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium
32539339 32539339 PRJNA1237347_P_NODE_279699_length_349_cov_1.115942_g273126_i0 PRJNA1237347 279699 349 1.115942 3.89463758 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 128 3.729999999999999e-35   NR MCA9357213.1 2030810 g273126 i0 60 0.859598853868195 100 40 86 0 300 1 16 115 MCA9357213.1 nucleoside 2-deoxyribosyltransferase domain-containing protein [Candidatus Kaiserbacteria bacterium] diamond 300 128 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;