RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA1237347" and tax_phylum = "Candidatus Gerdarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Gerdarchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1237347 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30294613 30294613 PRJNA1237347_P_NODE_309312_length_328_cov_0.901961_g302739_i0 PRJNA1237347 309312 328 0.901961 2.95843208 Candidatus Gerdarchaeota archaeon 2795491 Archaea Archaea 48.1 7.24e-4   NR RLI71502.1 2795491 g302739 i0 34.4 1.59146341463415 90 54 81.4 2 33 299 102 187 RLI71502.1 MAG: hypothetical protein DRP02_04620 [Candidatus Gerdarchaeota archaeon] diamond 522 48.1 1 Archaea   Promethearchaeati Candidatus Gerdarchaeota         Candidatus Gerdarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;