RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1237347" and tax_phylum = "Candidatus Elulimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Elulimicrobiota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1237347 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13093654 13093654 PRJNA1237347_P_NODE_270751_length_356_cov_1.883392_g264178_i0 PRJNA1237347 270751 356 1.883392 6.70487552 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 111 7.64e-26   NR NBP57936.1 2802965 g264178 i0 62 1.3314606741573 79 26 66.6 1 1 237 500 574 NBP57936.1 DUF2828 family protein [Candidatus Elulimicrobium humile] diamond 474 111 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
27736893 27736893 PRJNA1237347_P_NODE_425924_length_269_cov_1.178571_g419351_i0 PRJNA1237347 425924 269 1.178571 3.17035599 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 55.1 1.82e-6   NR NBP58432.1 2802965 g419351 i0 67.7 0.345724907063197 31 10 34.6 0 46 138 183 213 NBP58432.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 93 55.1 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
31684685 31684685 PRJNA1237347_P_NODE_246737_length_378_cov_0.868852_g240164_i0 PRJNA1237347 246737 378 0.868852 3.28426056 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 117 1.2099999999999999e-27   NR NBP57936.1 2802965 g240164 i0 56.7 1.73809523809524 104 41 81.7 2 324 16 184 284 NBP57936.1 DUF2828 family protein [Candidatus Elulimicrobium humile] diamond 657 117 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;