RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1237347" and tax_phylum = "Candidatus Curtissiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Curtissiibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1237347 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27736502 27736502 PRJNA1237347_P_NODE_123244_length_595_cov_2.791188_g116727_i0 PRJNA1237347 123244 595 2.791188 16.6075686 Candidatus Curtissbacteria bacterium 2750075 Bacteria Bacteria 71.2 3.19e-11   NR MBI2327029.1 2750075 g116727 i0 33.8 0.761344537815126 151 86 73.6 3 529 92 13 154 MBI2327029.1 aquaporin [Candidatus Curtissbacteria bacterium] diamond 453 71.2 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium
28431316 28431316 PRJNA1237347_P_NODE_427546_length_268_cov_1.579487_g420973_i0 PRJNA1237347 427546 268 1.579487 4.23302516 Candidatus Curtissbacteria bacterium RBG_13_4 2750075 Bacteria Bacteria 54.3 1.27e-6   NR OGD82985.1 1797706 g420973 i0 46.3 0.604477611940298 54 27 60.4 1 8 169 96 147 OGD82985.1 MAG: nucleotide exchange factor GrpE [Candidatus Curtissbacteria bacterium RBG_13_40_7] diamond 162 54.3 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium RBG_13_40_7
31178919 31178919 PRJNA1237347_P_NODE_58295_length_960_cov_5.945885_g52918_i0 PRJNA1237347 58295 960 5.945885 57.080496 Candidatus Curtissbacteria bacterium 2750075 Bacteria Bacteria 88.2 1.84e-16   NR MBI2327029.1 2750075 g52918 i0 30.5 1.359375 213 134 65 3 139 762 13 216 MBI2327029.1 aquaporin [Candidatus Curtissbacteria bacterium] diamond 1305 88.2 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;