RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1237347" and tax_phylum = "Acanthocephala"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Acanthocephala · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1237347 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27692145 27692145 PRJNA1237347_P_NODE_506844_length_247_cov_0.885057_g500271_i0 PRJNA1237347 506844 247 0.885057 2.18609079 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 102 2.5e-23   NR KAI0978066.1 141832 g500271 i0 63 16.6882591093117 81 27 98.4 1 245 3 67 144 KAI0978066.1 hypothetical protein GJ496_000063 [Pomphorhynchus laevis] diamond 4122 103 0.990291262135922 Eukaryota Opisthokonta Metazoa Acanthocephala Palaeacanthocephala Echinorhynchida Pomphorhynchidae Pomphorhynchus Pomphorhynchus laevis
28209687 28209687 PRJNA1237347_P_NODE_171906_length_479_cov_2.431034_g165336_i0 PRJNA1237347 171906 479 2.431034 11.64465286 Pomphorhynchus laevis 141832 Acanthocephala other_Eukaryota 81.3 4.04e-16   NR KAI0985931.1 141832 g165336 i0 32.5 0.945720250521921 151 102 94.6 0 470 18 1 151 KAI0985931.1 hypothetical protein GJ496_001014 [Pomphorhynchus laevis] diamond 453 81.3 1 Eukaryota Opisthokonta Metazoa Acanthocephala Palaeacanthocephala Echinorhynchida Pomphorhynchidae Pomphorhynchus Pomphorhynchus laevis
31241918 31241918 PRJNA1237347_P_NODE_270735_length_356_cov_1.901060_g264162_i0 PRJNA1237347 270735 356 1.90106 6.7677736 Pomphorhynchus laevis 141832 Acanthocephala other_Eukaryota 48.1 0.0016   NR KAI0980792.1 141832 g264162 i0 30.9 4.01966292134831 110 74 91 2 326 3 58 167 KAI0980792.1 hypothetical protein GJ496_004326 [Pomphorhynchus laevis] diamond 1431 48.1 1 Eukaryota Opisthokonta Metazoa Acanthocephala Palaeacanthocephala Echinorhynchida Pomphorhynchidae Pomphorhynchus Pomphorhynchus laevis
31716664 31716664 PRJNA1237347_P_NODE_396777_length_281_cov_1.245192_g390204_i0 PRJNA1237347 396777 281 1.245192 3.49898952 Pomphorhynchus laevis 141832 Acanthocephala other_Eukaryota 105 1.79e-24   NR KAI0987490.1 141832 g390204 i0 50.5 1.01423487544484 95 44 98.2 2 6 281 198 292 KAI0987490.1 hypothetical protein GJ496_007529 [Pomphorhynchus laevis] diamond 285 105 1 Eukaryota Opisthokonta Metazoa Acanthocephala Palaeacanthocephala Echinorhynchida Pomphorhynchidae Pomphorhynchus Pomphorhynchus laevis
31748345 31748345 PRJNA1237347_P_NODE_516417_length_246_cov_0.890173_g509844_i0 PRJNA1237347 516417 246 0.890173 2.18982558 Pomphorhynchus laevis 141832 Acanthocephala other_Eukaryota 57.4 2.71e-7   NR KAI0981312.1 141832 g509844 i0 40 5.67073170731707 75 45 91.5 0 230 6 2136 2210 KAI0981312.1 hypothetical protein GJ496_007485 [Pomphorhynchus laevis] diamond 1395 57.4 1 Eukaryota Opisthokonta Metazoa Acanthocephala Palaeacanthocephala Echinorhynchida Pomphorhynchidae Pomphorhynchus Pomphorhynchus laevis
31779975 31779975 PRJNA1237347_P_NODE_525477_length_244_cov_2.181287_g518904_i0 PRJNA1237347 525477 244 2.181287 5.32234028 Pomphorhynchus laevis 141832 Acanthocephala other_Eukaryota 75.5 1.12e-13   NR KAI0985369.1 141832 g518904 i0 46.9 2.87704918032787 81 42 99.6 1 1 243 168 247 KAI0985369.1 hypothetical protein GJ496_010107 [Pomphorhynchus laevis] diamond 702 75.5 1 Eukaryota Opisthokonta Metazoa Acanthocephala Palaeacanthocephala Echinorhynchida Pomphorhynchidae Pomphorhynchus Pomphorhynchus laevis
31798107 31798107 PRJNA1237347_P_NODE_323037_length_319_cov_1.247967_g316464_i0 PRJNA1237347 323037 319 1.247967 3.98101473 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 60.8 4e-8   NR KAI0982479.1 141832 g316464 i0 34.7 2.8025078369906 98 56 89.3 4 34 318 84 176 KAI0982479.1 hypothetical protein GJ496_003946 [Pomphorhynchus laevis] diamond 894 60.8 1 Eukaryota Opisthokonta Metazoa Acanthocephala Palaeacanthocephala Echinorhynchida Pomphorhynchidae Pomphorhynchus Pomphorhynchus laevis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;