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contig_metadata

34 rows where analysis = "diamond", bioproject = "PRJNA1237347" and tax_kingdom = "Fusobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Fusobacteriati · 34 ✖

bioproject 1

  • PRJNA1237347 · 34 ✖

analysis 1

  • diamond · 34 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1618379 1618379 PRJNA1237347_P_NODE_467402_length_252_cov_2.150838_g460829_i0 PRJNA1237347 467402 252 2.150838 5.42011176 Cetobacterium 180162 Bacteria Bacteria 117 6.78e-31   NR WP_332638013.1 2071632 g460829 i0 77.5 3.39285714285714 71 16 84.5 0 4 216 116 186 WP_332638013.1 iron-containing alcohol dehydrogenase, partial [Cetobacterium sp.] diamond 855 117 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp.
7990428 7990428 PRJNA1237347_P_NODE_133027_length_566_cov_2.791075_g126496_i0 PRJNA1237347 133027 566 2.791075 15.7974845 Cetobacterium sp. ZWU 2071632 Bacteria Bacteria 338 6.1400000000000005e-117   NR WP_052191665.1 1340502 g126496 i0 99.4 0.895759717314488 169 1 89.6 0 512 6 2 170 WP_052191665.1 pyridoxamine 5'-phosphate oxidase family protein [Cetobacterium sp. ZWU0022] diamond 507 338 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZWU0022
9266884 9266884 PRJNA1237347_P_NODE_214788_length_414_cov_0.900293_g208216_i0 PRJNA1237347 214788 414 0.900293 3.72721302 unclassified Cetobacterium 2630983 Bacteria Bacteria 270 6.709999999999997e-88   NR WP_047382972.1 2630983 g208216 i0 94.9 0.992753623188406 137 7 99.3 0 413 3 73 209 WP_047382972.1 MULTISPECIES: hypothetical protein [unclassified Cetobacterium] diamond 411 270 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
11823587 11823587 PRJNA1237347_P_NODE_529810_length_244_cov_0.900585_g523237_i0 PRJNA1237347 529810 244 0.900585 2.1974274 unclassified Cetobacterium 2630983 Bacteria Bacteria 134 4.75e-37   NR WP_047382483.1 2630983 g523237 i0 100 1.84426229508197 75 0 92.2 0 2 226 159 233 WP_047382483.1 MULTISPECIES: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [unclassified Cetobacterium] diamond 450 134 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
14373972 14373972 PRJNA1237347_P_NODE_536172_length_243_cov_0.905882_g529599_i0 PRJNA1237347 536172 243 0.905882 2.20129326 unclassified Cetobacterium 2630983 Bacteria Bacteria 164 3.25e-45   NR WP_047384178.1 2630983 g529599 i0 100 3.95061728395062 80 0 98.8 0 2 241 98 177 WP_047384178.1 MULTISPECIES: elongation factor G [unclassified Cetobacterium] diamond 960 164 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
24563941 24563941 PRJNA1237347_P_NODE_164480_length_493_cov_2.554762_g157916_i0 PRJNA1237347 164480 493 2.554762 12.59497666 unclassified Cetobacterium 2630983 Bacteria Bacteria 291 2.14e-91   NR WP_047381582.1 2630983 g157916 i0 99.4 0.955375253549696 157 1 95.5 0 1 471 578 734 WP_047381582.1 MULTISPECIES: ferrous iron transport protein B [unclassified Cetobacterium] diamond 471 291 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
26788525 26788525 PRJNA1237347_P_NODE_445041_length_261_cov_1.585106_g438468_i0 PRJNA1237347 445041 261 1.585106 4.13712666 unclassified Cetobacterium 2630983 Bacteria Bacteria 174 5.879999999999999e-52   NR WP_047383809.1 2630983 g438468 i0 100 1 87 0 100 0 1 261 197 283 WP_047383809.1 MULTISPECIES: N-acetylneuraminate lyase [unclassified Cetobacterium] diamond 261 174 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
27168045 27168045 PRJNA1237347_P_NODE_98862_length_686_cov_4.665579_g92485_i0 PRJNA1237347 98862 686 4.665579 32.00587194 Fusobacteriota bacterium 2060921 Bacteria Bacteria 162 2.329999999999999e-47   NR MEN9438723.1 2060921 g92485 i0 67.6 0.485422740524781 111 36 48.5 0 685 353 7 117 MEN9438723.1 hypothetical protein [Fusobacteriota bacterium] diamond 333 162 1 Bacteria   Fusobacteriati Fusobacteriota         Fusobacteriota bacterium
27263050 27263050 PRJNA1237347_P_NODE_514923_length_246_cov_0.890173_g508350_i0 PRJNA1237347 514923 246 0.890173 2.18982558 unclassified Cetobacterium 2630983 Bacteria Bacteria 147 6.31e-42   NR WP_052191737.1 2630983 g508350 i0 100 0.914634146341463 75 0 91.5 0 1 225 206 280 WP_052191737.1 MULTISPECIES: sirohydrochlorin cobaltochelatase [unclassified Cetobacterium] diamond 225 147 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
27421213 27421213 PRJNA1237347_P_NODE_529903_length_244_cov_0.900585_g523330_i0 PRJNA1237347 529903 244 0.900585 2.1974274 uncultured Cetobacterium sp. 527638 Bacteria Bacteria 147 4.57e-41   NR WP_294093735.1 527638 g523330 i0 100 0.860655737704918 70 0 86.1 0 212 3 1 70 WP_294093735.1 pyridoxal-phosphate-dependent aminotransferase family protein [uncultured Cetobacterium sp.] diamond 210 147 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium uncultured Cetobacterium sp.
27831278 27831278 PRJNA1237347_P_NODE_445224_length_261_cov_1.473404_g438651_i0 PRJNA1237347 445224 261 1.473404 3.84558444 unclassified Cetobacterium 2630983 Bacteria Bacteria 156 4.48e-45   NR WP_047381397.1 2630983 g438651 i0 100 0.942528735632184 82 0 94.3 0 14 259 203 284 WP_047381397.1 MULTISPECIES: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [unclassified Cetobacterium] diamond 246 156 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
27863004 27863004 PRJNA1237347_P_NODE_90065_length_729_cov_1.655488_g83805_i0 PRJNA1237347 90065 729 1.655488 12.06850752 Fusobacteriota bacterium 2060921 Bacteria Bacteria 63.5 6.34e-9   NR MEN9438723.1 2060921 g83805 i0 65 0.164609053497942 40 14 16.5 0 7 126 46 85 MEN9438723.1 hypothetical protein [Fusobacteriota bacterium] diamond 120 63.5 1 Bacteria   Fusobacteriati Fusobacteriota         Fusobacteriota bacterium
28115464 28115464 PRJNA1237347_P_NODE_512285_length_246_cov_0.890173_g505712_i0 PRJNA1237347 512285 246 0.890173 2.18982558 unclassified Cetobacterium 2630983 Bacteria Bacteria 88.2 7.19e-19   NR WP_047380848.1 2630983 g505712 i0 100 0.51219512195122 42 0 51.2 0 120 245 1 42 WP_047380848.1 MULTISPECIES: hypothetical protein [unclassified Cetobacterium] diamond 126 88.2 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
28178465 28178465 PRJNA1237347_P_NODE_509786_length_246_cov_1.768786_g503213_i0 PRJNA1237347 509786 246 1.768786 4.35121356 Cetobacterium sp. 8H 2759681 Bacteria Bacteria 53.1 7.42e-6   NR WP_185874302.1 2759681 g503213 i0 42.6 0.658536585365854 54 30 65.9 1 209 48 54 106 WP_185874302.1 alpha/beta hydrolase [Cetobacterium sp. 8H] diamond 162 53.1 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. 8H
28494560 28494560 PRJNA1237347_P_NODE_483087_length_250_cov_0.870056_g476514_i0 PRJNA1237347 483087 250 0.870056 2.17514 uncultured Cetobacterium sp. 527638 Bacteria Bacteria 155 9.32e-44   NR WP_294097126.1 527638 g476514 i0 100 0.984 82 0 98.4 0 248 3 144 225 WP_294097126.1 CCA tRNA nucleotidyltransferase [uncultured Cetobacterium sp.] diamond 246 155 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium uncultured Cetobacterium sp.
28620740 28620740 PRJNA1237347_P_NODE_366767_length_294_cov_2.085973_g360194_i0 PRJNA1237347 366767 294 2.085973 6.13276062 Fusobacterium gastrosuis 1755100 Bacteria Bacteria 43.9 0.0154   NR WP_367100204.1 1755100 g360194 i0 44.4 0.459183673469388 45 25 45.9 0 138 4 1 45 WP_367100204.1 replication/maintenance protein RepL [Fusobacterium gastrosuis] diamond 135 43.9 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium gastrosuis
28620935 28620935 PRJNA1237347_P_NODE_537927_length_243_cov_0.905882_g531354_i0 PRJNA1237347 537927 243 0.905882 2.20129326 Cetobacterium sp. ZOR 2071632 Bacteria Bacteria 130 9.11e-35   NR WP_047395616.1 1339239 g531354 i0 85 0.987654320987654 80 12 98.8 0 241 2 106 185 WP_047395616.1 PTS transporter subunit IIC, partial [Cetobacterium sp. ZOR0034] diamond 240 130 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZOR0034
29031437 29031437 PRJNA1237347_P_NODE_473688_length_251_cov_0.865169_g467115_i0 PRJNA1237347 473688 251 0.865169 2.17157419 Cetobacterium sp. ZWU 2071632 Bacteria Bacteria 153 4.88e-44   NR WP_047384903.1 1340502 g467115 i0 93.8 0.968127490039841 81 5 96.8 0 251 9 198 278 WP_047384903.1 hypothetical protein [Cetobacterium sp. ZWU0022] diamond 243 153 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZWU0022
29157763 29157763 PRJNA1237347_P_NODE_552229_length_241_cov_1.172619_g545656_i0 PRJNA1237347 552229 241 1.172619 2.82601179 Cetobacterium sp. ZOR 2071632 Bacteria Bacteria 119 1.04e-30   NR WP_047394689.1 1339239 g545656 i0 87.3 0.983402489626556 79 10 98.3 0 239 3 51 129 WP_047394689.1 PTS fructose transporter subunit IIC [Cetobacterium sp. ZOR0034] diamond 237 119 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZOR0034
29220682 29220682 PRJNA1237347_P_NODE_387849_length_285_cov_1.089623_g381276_i0 PRJNA1237347 387849 285 1.089623 3.10542555 unclassified Cetobacterium 2630983 Bacteria Bacteria 164 1.13e-48   NR WP_047381962.1 2630983 g381276 i0 100 0.884210526315789 84 0 88.4 0 283 32 145 228 WP_047381962.1 MULTISPECIES: SIMPL domain-containing protein [unclassified Cetobacterium] diamond 252 164 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
29852326 29852326 PRJNA1237347_P_NODE_568491_length_209_cov_5.529412_g561917_i0 PRJNA1237347 568491 209 5.529412 11.55647108 unclassified Cetobacterium 2630983 Bacteria Bacteria 101 1.88e-26   NR WP_047384781.1 2630983 g561917 i0 100 0.760765550239234 53 0 76.1 0 51 209 1 53 WP_047384781.1 MULTISPECIES: hypothetical protein [unclassified Cetobacterium] diamond 159 101 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
29915541 29915541 PRJNA1237347_P_NODE_514651_length_246_cov_0.890173_g508078_i0 PRJNA1237347 514651 246 0.890173 2.18982558 Cetobacterium somerae 188913 Bacteria Bacteria 139 1.89e-37   NR WP_240222312.1 188913 g508078 i0 84 0.98780487804878 81 13 98.8 0 245 3 221 301 WP_240222312.1 replication initiation protein [Cetobacterium somerae] diamond 243 139 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
30059810 30059810 PRJNA1237347_P_NODE_223911_length_402_cov_2.401216_g217339_i0 PRJNA1237347 223911 402 2.401216 9.65288832 Bacteria 2 Bacteria Bacteria 45.1 0.0286   NR WP_064616468.1 34105 g217339 i0 28.3 5.55970149253731 120 72 81.3 6 14 340 291 407 WP_064616468.1 uracil permease [Streptobacillus moniliformis] diamond 2235 45.1 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Streptobacillus Streptobacillus moniliformis
30294701 30294701 PRJNA1237347_P_NODE_374432_length_290_cov_3.133641_g367859_i0 PRJNA1237347 374432 290 3.133641 9.0875589 Cetobacterium 180162 Bacteria Bacteria 120 7.61e-34   NR WP_291941138.1 180162 g367859 i0 90.6 0.548275862068966 53 5 54.8 0 117 275 1 53 WP_291941138.1 MULTISPECIES: rubredoxin [Cetobacterium] diamond 159 120 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
30578562 30578562 PRJNA1237347_P_NODE_49233_length_1065_cov_3.723790_g44344_i0 PRJNA1237347 49233 1065 3.72379 39.6583635 Fusobacteriota bacterium 2060921 Bacteria Bacteria 162 1e-45   NR MEN9438723.1 2060921 g44344 i0 67 0.315492957746479 112 37 31.5 0 1064 729 7 118 MEN9438723.1 hypothetical protein [Fusobacteriota bacterium] diamond 336 162 1 Bacteria   Fusobacteriati Fusobacteriota         Fusobacteriota bacterium
30768498 30768498 PRJNA1237347_P_NODE_529574_length_244_cov_0.900585_g523001_i0 PRJNA1237347 529574 244 0.900585 2.1974274 unclassified Cetobacterium 2630983 Bacteria Bacteria 168 2.99e-51   NR WP_047384286.1 2630983 g523001 i0 98.8 0.995901639344262 81 1 99.6 0 1 243 38 118 WP_047384286.1 MULTISPECIES: nicotinate (nicotinamide) nucleotide adenylyltransferase [unclassified Cetobacterium] diamond 243 168 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
31337127 31337127 PRJNA1237347_P_NODE_489596_length_249_cov_0.875000_g483023_i0 PRJNA1237347 489596 249 0.875 2.17875 Cetobacterium sp. ZWU 2071632 Bacteria Bacteria 119 4.6e-29   NR WP_047383662.1 1340502 g483023 i0 98.3 0.698795180722892 58 1 69.9 0 249 76 674 731 WP_047383662.1 alpha-galactosidase [Cetobacterium sp. ZWU0022] diamond 174 119 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZWU0022
31400736 31400736 PRJNA1237347_P_NODE_528316_length_244_cov_0.900585_g521743_i0 PRJNA1237347 528316 244 0.900585 2.1974274 unclassified Cetobacterium 2630983 Bacteria Bacteria 112 2.4799999999999998e-28   NR WP_047382518.1 2630983 g521743 i0 98.3 0.713114754098361 58 1 71.3 0 176 3 1 58 WP_047382518.1 MULTISPECIES: MurR/RpiR family transcriptional regulator [unclassified Cetobacterium] diamond 174 112 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
31513920 31513920 PRJNA1237347_P_NODE_320136_length_321_cov_0.931452_g313563_i0 PRJNA1237347 320136 321 0.931452 2.98996092 Bacteria 2 Bacteria Bacteria 53.5 7.6e-6   NR WP_321328585.1 544433 g313563 i0 40.6 2.26168224299065 64 38 59.8 0 309 118 3 66 WP_321328585.1 histidine phosphatase family protein [uncultured Ilyobacter sp.] diamond 726 53.5 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Ilyobacter uncultured Ilyobacter sp.
31716809 31716809 PRJNA1237347_P_NODE_507097_length_247_cov_0.885057_g500524_i0 PRJNA1237347 507097 247 0.885057 2.18609079 unclassified Cetobacterium 2630983 Bacteria Bacteria 129 6.5599999999999996e-34   NR WP_047382048.1 2630983 g500524 i0 100 0.765182186234818 63 0 76.5 0 1 189 22 84 WP_047382048.1 MULTISPECIES: M20 family metallopeptidase [unclassified Cetobacterium] diamond 189 129 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
32064663 32064663 PRJNA1237347_P_NODE_466198_length_253_cov_1.283333_g459625_i0 PRJNA1237347 466198 253 1.283333 3.24683249 unclassified Cetobacterium 2630983 Bacteria Bacteria 163 7.78e-46   NR WP_047381478.1 2630983 g459625 i0 100 0.99604743083004 84 0 99.6 0 253 2 247 330 WP_047381478.1 MULTISPECIES: ribonuclease Y [unclassified Cetobacterium] diamond 252 163 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
32096387 32096387 PRJNA1237347_P_NODE_481158_length_250_cov_0.870056_g474585_i0 PRJNA1237347 481158 250 0.870056 2.17514 Fusobacterium sp. 68766 Bacteria Bacteria 158 2.849999999999999e-43   NR MFR3298511.1 68766 g474585 i0 96.4 1.992 83 3 99.6 0 1 249 322 404 MFR3298511.1 ATP-binding protein [Fusobacterium sp.] diamond 498 158 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium sp.
32146467 32146467 PRJNA1237347_P_NODE_487158_length_249_cov_1.312500_g480585_i0 PRJNA1237347 487158 249 1.3125 3.268125 Bacteria 2 Bacteria Bacteria 57 3.03e-7   NR WP_012861092.1 826 g480585 i0 42.9 5.08433734939759 70 39 84.3 1 248 39 188 256 WP_012861092.1 STM4015 family protein [Sebaldella termitidis] diamond 1266 57 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Sebaldella Sebaldella termitidis
32444769 32444769 PRJNA1237347_P_NODE_516619_length_246_cov_0.890173_g510046_i0 PRJNA1237347 516619 246 0.890173 2.18982558 unclassified Cetobacterium 2630983 Bacteria Bacteria 168 1.1e-51   NR WP_047381648.1 2630983 g510046 i0 100 0.98780487804878 81 0 98.8 0 3 245 68 148 WP_047381648.1 MULTISPECIES: heme utilization cystosolic carrier protein HutX [unclassified Cetobacterium] diamond 243 168 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;