RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1233465" and tax_phylum = "Nanobdellota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Nanobdellota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1233465 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32983931 32983931 PRJNA1233465b_S_NODE_74867_length_305_cov_5.542969_g73182_i0 PRJNA1233465 74867 305 5.542969 16.90605545 Nanobdellota archaeon 2026764 Archaea Archaea 50.1 1.95e-4   NR MCK4521546.1 2026764 g73182 i0 33.7 0.99344262295082 101 56 99.3 3 305 3 164 253 MCK4521546.1 hypothetical protein [Nanoarchaeota archaeon] diamond 303 50.1 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
32985133 32985133 PRJNA1233465f_S_NODE_117907_length_222_cov_3.063584_g115627_i0 PRJNA1233465 117907 222 3.063584 6.80115648 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 133 3.4200000000000003e-36   NR HLC31679.1 2910166 g115627 i0 83.8 6 74 12 100 0 1 222 116 189 HLC31679.1 30S ribosomal protein S2 [Candidatus Nanoarchaeia archaeon] diamond 1332 133 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon
33060280 33060280 PRJNA1233465d_S_NODE_62541_length_221_cov_1.843023_g61430_i0 PRJNA1233465 62541 221 1.843023 4.07308083 Archaea 2157 Archaea Archaea 134 1.16e-36   NR MEK6888688.1 2026764 g61430 i0 83.6 7.8868778280543 73 12 99.1 0 220 2 126 198 MEK6888688.1 30S ribosomal protein S2 [Nanoarchaeota archaeon] diamond 1743 135 0.992592592592593 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;