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contig_metadata

20 rows where analysis = "diamond", bioproject = "PRJNA1233465" and tax_phylum = "Fibrobacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 20 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1233465 · 20 ✖

analysis 1

  • diamond · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26230084 26230084 PRJNA1233465e_S_NODE_55054_length_247_cov_2.333333_g53744_i0 PRJNA1233465 55054 247 2.333333 5.76333251 Fibrobacterota bacterium 2052160 Bacteria Bacteria 103 9.44e-26   NR MEN9353122.1 2052160 g53744 i0 65 0.97165991902834 80 28 97.2 0 242 3 71 150 MEN9353122.1 hypothetical protein [Fibrobacterota bacterium] diamond 240 103 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
32916053 32916053 PRJNA1233465e_S_NODE_119905_length_179_cov_1.176923_g118595_i0 PRJNA1233465 119905 179 1.176923 2.10669217 Fibrobacteria bacterium 2725311 Bacteria Bacteria 117 3.18e-30   NR HQF55948.1 2725311 g118595 i0 100 0.988826815642458 59 0 98.9 0 177 1 31 89 HQF55948.1 TIGR02147 family protein [Fibrobacteria bacterium] diamond 177 117 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
32916971 32916971 PRJNA1233465f_S_NODE_248089_length_164_cov_1.773913_g245809_i0 PRJNA1233465 248089 164 1.773913 2.90921732 Fibrobacterota bacterium 2052160 Bacteria Bacteria 80.9 2.35e-17   NR MEN9353122.1 2052160 g245809 i0 72.2 0.98780487804878 54 15 98.8 0 162 1 76 129 MEN9353122.1 hypothetical protein [Fibrobacterota bacterium] diamond 162 80.9 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
32934406 32934406 PRJNA1233465f_S_NODE_77713_length_266_cov_1.175115_g75433_i0 PRJNA1233465 77713 266 1.175115 3.1258059 Fibrobacteria bacterium 2725311 Bacteria Bacteria 176 1.4e-53   NR HQF53669.1 2725311 g75433 i0 92 0.992481203007519 88 7 99.2 0 266 3 112 199 HQF53669.1 DUF413 domain-containing protein [Fibrobacteria bacterium] diamond 264 176 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
32950467 32950467 PRJNA1233465e_S_NODE_140338_length_168_cov_1.260504_g139028_i0 PRJNA1233465 140338 168 1.260504 2.11764672 Fibrobacteria bacterium 2725311 Bacteria Bacteria 75.1 1.39e-14   NR HQF55467.1 2725311 g139028 i0 66.1 5.44642857142857 56 18 98.2 1 2 166 45 100 HQF55467.1 TetR/AcrR family transcriptional regulator [Fibrobacteria bacterium] diamond 915 75.1 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
32951119 32951119 PRJNA1233465f_S_NODE_163402_length_193_cov_2.513889_g161122_i0 PRJNA1233465 163402 193 2.513889 4.85180577 Fibrobacteria bacterium 2725311 Bacteria Bacteria 136 2.21e-35   NR HQF55950.1 2725311 g161122 i0 100 0.994818652849741 64 0 99.5 0 2 193 102 165 HQF55950.1 hypothetical protein [Fibrobacteria bacterium] diamond 192 136 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
32968526 32968526 PRJNA1233465f_S_NODE_228866_length_168_cov_1.285714_g226586_i0 PRJNA1233465 228866 168 1.285714 2.15999952 Fibrobacteria bacterium 2725311 Bacteria Bacteria 113 7.74e-28   NR HQF53608.1 2725311 g226586 i0 94.5 0.982142857142857 55 3 98.2 0 2 166 302 356 HQF53608.1 carboxypeptidase M32 [Fibrobacteria bacterium] diamond 165 113 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
32984957 32984957 PRJNA1233465e_S_NODE_70003_length_223_cov_2.850575_g68693_i0 PRJNA1233465 70003 223 2.850575 6.35678225 Fibrobacterota bacterium 2052160 Bacteria Bacteria 131 4.22e-34   NR MEN9354910.1 2052160 g68693 i0 84.7 0.968609865470852 72 11 96.9 0 217 2 386 457 MEN9354910.1 hypothetical protein [Fibrobacterota bacterium] diamond 216 131 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
33002347 33002347 PRJNA1233465f_S_NODE_177459_length_187_cov_1.108696_g175179_i0 PRJNA1233465 177459 187 1.108696 2.07326152 Fibrobacterota bacterium 2052160 Bacteria Bacteria 125 8.789999999999999e-32   NR MEN9307030.1 2052160 g175179 i0 88.5 1.9572192513369 61 7 97.9 0 185 3 435 495 MEN9307030.1 hypothetical protein [Fibrobacterota bacterium] diamond 366 125 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
33002472 33002472 PRJNA1233465f_S_NODE_236739_length_166_cov_1.940171_g234459_i0 PRJNA1233465 236739 166 1.940171 3.22068386 Fibrobacterota bacterium 2052160 Bacteria Bacteria 101 1.8399999999999998e-23   NR MEN9354910.1 2052160 g234459 i0 83.6 0.993975903614458 55 9 99.4 0 165 1 374 428 MEN9354910.1 hypothetical protein [Fibrobacterota bacterium] diamond 165 101 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
33002774 33002774 PRJNA1233465f_S_NODE_76259_length_268_cov_1.374429_g73979_i0 PRJNA1233465 76259 268 1.374429 3.68346972 Fibrobacteria bacterium 2725311 Bacteria Bacteria 162 3.53e-44   NR HQF55217.1 2725311 g73979 i0 91 0.996268656716418 89 8 99.6 0 267 1 271 359 HQF55217.1 Calx-beta domain-containing protein [Fibrobacteria bacterium] diamond 267 162 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
33036140 33036140 PRJNA1233465e_S_NODE_97060_length_195_cov_1.438356_g95750_i0 PRJNA1233465 97060 195 1.438356 2.8047942 Fibrobacteria bacterium 2725311 Bacteria Bacteria 47 6.24e-4   NR HNY32412.1 2725311 g95750 i0 44.4 1.66153846153846 54 30 83.1 0 179 18 1 54 HNY32412.1 transglycosylase SLT domain-containing protein [Fibrobacteria bacterium] diamond 324 47 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
33051979 33051979 PRJNA1233465b_S_NODE_388069_length_151_cov_4.725490_g386384_i0 PRJNA1233465 388069 151 4.72549 7.1354899 Chitinispirillaceae bacterium 2813024 Bacteria Bacteria 43.1 0.00788   NR MBN1758209.1 2813024 g386384 i0 50 0.874172185430464 44 21 87.4 1 148 17 332 374 MBN1758209.1 hypothetical protein [Chitinispirillaceae bacterium] diamond 132 43.1 1 Bacteria FCB group Pseudomonadati Fibrobacterota Chitinispirillia Chitinispirillales Chitinispirillaceae   Chitinispirillaceae bacterium
33069765 33069765 PRJNA1233465e_S_NODE_133677_length_171_cov_1.713115_g132367_i0 PRJNA1233465 133677 171 1.713115 2.92942665 Fibrobacterota bacterium 2052160 Bacteria Bacteria 77.4 8.28e-15   NR MDB5047255.1 2052160 g132367 i0 77.1 2.59649122807018 48 11 84.2 0 145 2 585 632 MDB5047255.1 hypothetical protein [Fibrobacterota bacterium] diamond 444 77.4 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
33070074 33070074 PRJNA1233465e_S_NODE_67549_length_227_cov_0.977528_g66239_i0 PRJNA1233465 67549 227 0.977528 2.21898856 Fibrobacteria bacterium 2725311 Bacteria Bacteria 48.1 3.69e-4   NR HQF55200.1 2725311 g66239 i0 68.8 0.422907488986784 32 10 42.3 0 1 96 385 416 HQF55200.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Fibrobacteria bacterium] diamond 96 48.1 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
33103954 33103954 PRJNA1233465e_S_NODE_122558_length_177_cov_2.968750_g121248_i0 PRJNA1233465 122558 177 2.96875 5.2546875 Fibrobacteria bacterium 2725311 Bacteria Bacteria 123 5.239999999999999e-31   NR HQF55950.1 2725311 g121248 i0 100 0.983050847457627 58 0 98.3 0 176 3 107 164 HQF55950.1 hypothetical protein [Fibrobacteria bacterium] diamond 174 123 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
33104443 33104443 PRJNA1233465e_S_NODE_93238_length_198_cov_1.711409_g91928_i0 PRJNA1233465 93238 198 1.711409 3.38858982 Fibrobacteria bacterium 2725311 Bacteria Bacteria 135 4.519999999999999e-35   NR HQF55950.1 2725311 g91928 i0 93.9 1 66 4 100 0 198 1 276 341 HQF55950.1 hypothetical protein [Fibrobacteria bacterium] diamond 198 135 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
33156170 33156170 PRJNA1233465f_S_NODE_69408_length_279_cov_1.160870_g67128_i0 PRJNA1233465 69408 279 1.16087 3.2388273 Fibrobacteria bacterium 2725311 Bacteria Bacteria 151 2.68e-40   NR HQF53638.1 2725311 g67128 i0 83.7 0.989247311827957 92 15 98.9 0 3 278 665 756 HQF53638.1 S49 family peptidase [Fibrobacteria bacterium] diamond 276 151 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
33172243 33172243 PRJNA1233465e_S_NODE_113552_length_183_cov_1.305970_g112242_i0 PRJNA1233465 113552 183 1.30597 2.3899251 Fibrobacteria bacterium 2725311 Bacteria Bacteria 108 1.55e-25   NR HQF53638.1 2725311 g112242 i0 88.5 1 61 7 100 0 1 183 660 720 HQF53638.1 S49 family peptidase [Fibrobacteria bacterium] diamond 183 108 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
33172790 33172790 PRJNA1233465f_S_NODE_113592_length_226_cov_1.887006_g111312_i0 PRJNA1233465 113592 226 1.887006 4.26463356 Fibrobacteria bacterium 2725311 Bacteria Bacteria 70.9 2.2e-12   NR HQF54651.1 2725311 g111312 i0 94.7 0.504424778761062 38 2 50.4 0 112 225 1 38 HQF54651.1 hypothetical protein [Fibrobacteria bacterium] diamond 114 70.9 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;