RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1233465" and tax_phylum = "Candidatus Thorarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Thorarchaeota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1233465 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32967900 32967900 PRJNA1233465e_S_NODE_51106_length_255_cov_1.733010_g49796_i0 PRJNA1233465 51106 255 1.73301 4.4191755 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 42.7 0.0436   NR MEE9540811.1 2053491 g49796 i0 48.4 0.364705882352941 31 16 36.5 0 142 234 103 133 MEE9540811.1 hypothetical protein [Candidatus Thorarchaeota archaeon] diamond 93 42.7 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
32984630 32984630 PRJNA1233465e_S_NODE_144867_length_166_cov_2.179487_g143557_i0 PRJNA1233465 144867 166 2.179487 3.61794842 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 52 3.23e-6   NR TFH07052.1 2053491 g143557 i0 48.1 0.939759036144578 52 26 92.2 1 165 13 103 154 TFH07052.1 MAG: hypothetical protein E4H14_09400 [Candidatus Thorarchaeota archaeon] diamond 156 52 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
33173469 33173469 PRJNA1233465f_S_NODE_79472_length_263_cov_2.827103_g77192_i0 PRJNA1233465 79472 263 2.827103 7.43528089 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 55.1 7.4e-7   NR TFH07052.1 2053491 g77192 i0 48.1 0.615969581749049 54 27 60.5 1 87 245 101 154 TFH07052.1 MAG: hypothetical protein E4H14_09400 [Candidatus Thorarchaeota archaeon] diamond 162 55.1 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;