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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1233465" and tax_phylum = "Candidatus Levyibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Levyibacteriota · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA1233465 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32931790 32931790 PRJNA1233465a_S_NODE_37985_length_325_cov_1.134058_g36711_i0 PRJNA1233465 37985 325 1.134058 3.6856885 Candidatus Levyibacteriota bacterium 2052151 Bacteria Bacteria 129 8.8e-34   NR MFH1832971.1 2052151 g36711 i0 54.6 1.99384615384615 108 49 99.7 0 324 1 44 151 MFH1832971.1 glycosyltransferase family 2 protein [Candidatus Levyibacteriota bacterium] diamond 648 129 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levyibacteriota bacterium
33000392 33000392 PRJNA1233465b_S_NODE_139011_length_243_cov_1.386598_g137326_i0 PRJNA1233465 139011 243 1.386598 3.36943314 Candidatus Levybacteria bacterium GW2 2052151 Bacteria Bacteria 117 6.53e-30   NR KKQ38505.1 1618467 g137326 i0 64.2 2 81 29 100 0 1 243 67 147 KKQ38505.1 MAG: Glycosyl transferase, family 2 [Candidatus Levybacteria bacterium GW2011_GWC2_37_7] diamond 486 117 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levybacteria bacterium GW2011_GWC2_37_7
33068828 33068828 PRJNA1233465b_S_NODE_278421_length_181_cov_1.507576_g276736_i0 PRJNA1233465 278421 181 1.507576 2.72871256 Candidatus Levyibacteriota bacterium 2052151 Bacteria Bacteria 99.8 1.15e-22   NR MDO8269548.1 2052151 g276736 i0 86.4 1.95580110497238 59 8 97.8 0 178 2 1 59 MDO8269548.1 DNA polymerase III subunit gamma/tau [Candidatus Levyibacteriota bacterium] diamond 354 99.8 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levyibacteriota bacterium
33077159 33077159 PRJNA1233465b_S_NODE_156837_length_231_cov_3.923077_g155152_i0 PRJNA1233465 156837 231 3.923077 9.06230787 Pseudomonadati 3379134 Bacteria Bacteria 120 1.2e-30   NR OGH11585.1 1798587 g155152 i0 68.4 4.93506493506494 76 24 98.7 0 230 3 12 87 OGH11585.1 MAG: hypothetical protein A2684_03360 [Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_36_15b] diamond 1140 120 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_36_15b
33086655 33086655 PRJNA1233465d_S_NODE_59246_length_226_cov_3.401130_g58135_i0 PRJNA1233465 59246 226 3.40113 7.6865538 Candidatus Levybacteria bacterium RIFCSPHIGHO2_ 2052151 Bacteria Bacteria 85.1 1.82e-18   NR OGH14898.1 1798591 g58135 i0 78.8 1.36725663716814 52 11 69 0 156 1 82 133 OGH14898.1 MAG: bacteriocin-protection protein, YdeI/OmpD-associated family [Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_38_26] diamond 309 85.1 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_38_26
33145527 33145527 PRJNA1233465b_S_NODE_202383_length_208_cov_1.723270_g200698_i0 PRJNA1233465 202383 208 1.72327 3.5844016 Bacteria 2 Bacteria Bacteria 103 1.2399999999999999e-23   NR OGH11768.1 1798586 g200698 i0 73.4 4.83173076923077 64 17 92.3 0 208 17 202 265 OGH11768.1 MAG: hypothetical protein A2857_04720 [Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_36_15] diamond 1005 103 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_36_15
33153337 33153337 PRJNA1233465a_S_NODE_138104_length_202_cov_1.241830_g136830_i0 PRJNA1233465 138104 202 1.24183 2.5084966 Candidatus Levyibacteriota bacterium 2052151 Bacteria Bacteria 104 3.38e-24   NR MDO8269548.1 2052151 g136830 i0 86.9 1.81188118811881 61 8 90.6 0 184 2 1 61 MDO8269548.1 DNA polymerase III subunit gamma/tau [Candidatus Levyibacteriota bacterium] diamond 366 104 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levyibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;