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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA1233465" and tax_phylum = "Candidatus Doudnaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Doudnaibacteriota · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA1233465 · 11 ✖

analysis 1

  • diamond · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32916252 32916252 PRJNA1233465e_S_NODE_25081_length_346_cov_3.053872_g23771_i0 PRJNA1233465 25081 346 3.053872 10.56639712 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 149 5.31e-39   NR MBI4049258.1 2052150 g23771 i0 90 2.08092485549133 80 8 69.4 0 106 345 544 623 MBI4049258.1 DNA polymerase III subunit alpha [Candidatus Doudnabacteria bacterium] diamond 720 149 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium
32932630 32932630 PRJNA1233465d_S_NODE_10545_length_467_cov_3.136364_g9458_i0 PRJNA1233465 10545 467 3.136364 14.64681988 Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_ 2052150 Bacteria Bacteria 170 6.07e-50   NR OGE88557.1 1817834 g9458 i0 58.1 0.873661670235546 136 56 86.7 1 42 446 79 214 OGE88557.1 MAG: hypothetical protein A3B77_03330 [Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_02_FULL_49_24] diamond 408 170 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_02_FULL_49_24
32975165 32975165 PRJNA1233465d_S_NODE_30642_length_300_cov_1.609562_g29531_i0 PRJNA1233465 30642 300 1.609562 4.828686 Bacteria 2 Bacteria Bacteria 118 7.96e-30   NR OGE81182.1 1817825 g29531 i0 83.1 3.02 77 12 77 1 289 59 235 310 OGE81182.1 MAG: DNA-directed RNA polymerase subunit alpha [Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_46_24] diamond 906 118 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_46_24
32985634 32985634 PRJNA1233465f_S_NODE_35963_length_368_cov_4.341693_g33683_i0 PRJNA1233465 35963 368 4.341693 15.97743024 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 153 2.31e-40   NR MBI4049258.1 2052150 g33683 i0 90.4 2.02989130434783 83 8 67.7 0 120 368 544 626 MBI4049258.1 DNA polymerase III subunit alpha [Candidatus Doudnabacteria bacterium] diamond 747 153 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium
33001192 33001192 PRJNA1233465d_S_NODE_31283_length_297_cov_3.350806_g30172_i0 PRJNA1233465 31283 297 3.350806 9.95189382 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 152 3.02e-40   NR MBI4049258.1 2052150 g30172 i0 90.2 2.48484848484848 82 8 82.8 0 248 3 544 625 MBI4049258.1 DNA polymerase III subunit alpha [Candidatus Doudnabacteria bacterium] diamond 738 152 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium
33002544 33002544 PRJNA1233465f_S_NODE_26619_length_415_cov_5.696721_g24359_i0 PRJNA1233465 26619 415 5.696721 23.64139215 Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_ 2052150 Bacteria Bacteria 161 1.3299999999999999e-46   NR OGE88557.1 1817834 g24359 i0 56.8 0.95421686746988 132 56 94.7 1 414 22 83 214 OGE88557.1 MAG: hypothetical protein A3B77_03330 [Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_02_FULL_49_24] diamond 396 161 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_02_FULL_49_24
33002670 33002670 PRJNA1233465f_S_NODE_50531_length_319_cov_2.740741_g48251_i0 PRJNA1233465 50531 319 2.740741 8.74296379 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 171 2.62e-49   NR MBI2356210.1 2052150 g48251 i0 78.1 0.987460815047022 105 22 98.7 1 318 4 269 372 MBI2356210.1 peptidoglycan DD-metalloendopeptidase family protein [Candidatus Doudnabacteria bacterium] diamond 315 171 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium
33068026 33068026 PRJNA1233465a_S_NODE_155749_length_192_cov_2.062937_g154475_i0 PRJNA1233465 155749 192 2.062937 3.96083904 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 51.2 1.98e-5   NR MBL8030593.1 2052150 g154475 i0 69.7 0.515625 33 10 51.6 0 192 94 654 686 MBL8030593.1 hypothetical protein [Candidatus Doudnabacteria bacterium] diamond 99 51.2 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium
33070740 33070740 PRJNA1233465f_S_NODE_38285_length_359_cov_2.500000_g36005_i0 PRJNA1233465 38285 359 2.5 8.975 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 89.7 1.23e-18   NR MBI3952743.1 2052150 g36005 i0 84.9 1.32869080779944 53 8 44.3 0 359 201 261 313 MBI3952743.1 DNA-directed RNA polymerase subunit alpha [Candidatus Doudnabacteria bacterium] diamond 477 89.7 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium
33087043 33087043 PRJNA1233465e_S_NODE_22638_length_362_cov_2.204473_g21328_i0 PRJNA1233465 22638 362 2.204473 7.98019226 Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_ 2052150 Bacteria Bacteria 149 4.469999999999999e-42   NR OGE88557.1 1817834 g21328 i0 57 1.00276243093923 121 51 99.4 1 360 1 89 209 OGE88557.1 MAG: hypothetical protein A3B77_03330 [Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_02_FULL_49_24] diamond 363 149 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_02_FULL_49_24
33162757 33162757 PRJNA1233465e_S_NODE_65912_length_229_cov_1.683333_g64602_i0 PRJNA1233465 65912 229 1.683333 3.85483257 Bacteria 2 Bacteria Bacteria 109 7.910000000000001e-27   NR OGE81182.1 1817825 g64602 i0 87.5 3.35371179039301 64 8 83.8 0 228 37 247 310 OGE81182.1 MAG: DNA-directed RNA polymerase subunit alpha [Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_46_24] diamond 768 109 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_46_24

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;