RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1233465" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1233465 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32992386 32992386 PRJNA1233465f_S_NODE_123099_length_218_cov_1.982249_g120819_i0 PRJNA1233465 123099 218 1.982249 4.32130282 Pseudomonadati 3379134 Bacteria Bacteria 53.5 3.94e-6   NR MCB5271919.1 2030808 g120819 i0 61.1 1.51376146788991 36 14 49.5 0 111 218 1 36 MCB5271919.1 DUF4007 family protein [Candidatus Cloacimonadota bacterium] diamond 330 53.5 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
33034134 33034134 PRJNA1233465a_S_NODE_201276_length_173_cov_1.088710_g200002_i0 PRJNA1233465 201276 173 1.08871 1.8834683 Candidatus Syntrophosphaera sp. 2819277 Bacteria Bacteria 41.2 0.0397   NR MBW6513725.1 2819277 g200002 i0 33.3 0.728323699421965 42 28 72.8 0 16 141 70 111 MBW6513725.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Candidatus Syntrophosphaera sp.] diamond 126 41.2 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales Candidatus Cloacimonadaceae Candidatus Syntrophosphaera Candidatus Syntrophosphaera sp.
33162451 33162451 PRJNA1233465b_S_NODE_186896_length_215_cov_2.355422_g185211_i0 PRJNA1233465 186896 215 2.355422 5.0641573 Pseudomonadati 3379134 Bacteria Bacteria 44.7 0.00522   NR MCB5271919.1 2030808 g185211 i0 56.3 0.906976744186046 32 14 44.7 0 97 2 1 32 MCB5271919.1 DUF4007 family protein [Candidatus Cloacimonadota bacterium] diamond 195 44.7 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;