RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1233465" and tax_phylum = "Candidatus Blackallbacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Blackallbacteria · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1233465 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32916300 32916300 PRJNA1233465e_S_NODE_34241_length_302_cov_2.893281_g32931_i0 PRJNA1233465 34241 302 2.893281 8.73770862 bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_5 2014262 Bacteria Bacteria 101 1.58e-22   NR PIQ28035.1 2014262 g32931 i0 46.5 1.00331125827815 101 53 99.3 1 300 1 344 444 PIQ28035.1 MAG: cell division protein FtsK [bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_50_49_26] diamond 303 101 1 Bacteria Bacteria candidate phyla   Candidatus Blackallbacteria         bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_50_49_26
33019805 33019805 PRJNA1233465f_S_NODE_72772_length_273_cov_3.107143_g70492_i0 PRJNA1233465 72772 273 3.107143 8.48250039 bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_5 2014262 Bacteria Bacteria 89 3.04e-18   NR PIQ28035.1 2014262 g70492 i0 45.1 2 91 49 98.9 1 3 272 344 434 PIQ28035.1 MAG: cell division protein FtsK [bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_50_49_26] diamond 546 89 1 Bacteria Bacteria candidate phyla   Candidatus Blackallbacteria         bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_50_49_26
33050962 33050962 PRJNA1233465a_S_NODE_148397_length_196_cov_1.727891_g147123_i0 PRJNA1233465 148397 196 1.727891 3.38666636 bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_5 2014262 Bacteria Bacteria 70.9 2.48e-12   NR PIQ28035.1 2014262 g147123 i0 46.8 5.75510204081633 62 33 94.9 0 10 195 332 393 PIQ28035.1 MAG: cell division protein FtsK [bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_50_49_26] diamond 1128 70.9 1 Bacteria Bacteria candidate phyla   Candidatus Blackallbacteria         bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_50_49_26

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;