contig_metadata
13 rows where analysis = "diamond", bioproject = "PRJNA1233317" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1610244 | 1610244 | PRJNA1233317_S_NODE_14562_length_201_cov_3.007042_g14526_i0 | PRJNA1233317 | 14562 | 201 | 3.007042 | 6.04415442 | Arthrobacter russicus | 172040 | Bacteria | Bacteria | 149 | 4.24e-43 | NR | WP_309796214.1 | 172040 | g14526 | i0 | 100 | 1 | 67 | 0 | 100 | 0 | 1 | 201 | 119 | 185 | WP_309796214.1 class I SAM-dependent methyltransferase [Arthrobacter russicus] | diamond | 201 | 149 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Arthrobacter | Arthrobacter russicus | ||
| 5438937 | 5438937 | PRJNA1233317_S_NODE_9525_length_252_cov_0.948187_g9489_i0 | PRJNA1233317 | 9525 | 252 | 0.948187 | 2.38943124 | Microbacterium | 33882 | Bacteria | Bacteria | 115 | 3.2000000000000003e-28 | NR | WP_045247306.1 | 33882 | g9489 | i0 | 95.2 | 0.738095238095238 | 62 | 3 | 73.8 | 0 | 4 | 189 | 349 | 410 | WP_045247306.1 MULTISPECIES: gephyrin-like molybdotransferase Glp [Microbacterium] | diamond | 186 | 115 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | |||
| 13089311 | 13089311 | PRJNA1233317_S_NODE_3651_length_345_cov_3.461538_g3615_i0 | PRJNA1233317 | 3651 | 345 | 3.461538 | 11.9423061 | Microbacterium | 33882 | Bacteria | Bacteria | 219 | 2.07e-65 | NR | WP_288453179.1 | 191216 | g3615 | i0 | 100 | 3 | 115 | 0 | 100 | 0 | 345 | 1 | 370 | 484 | WP_288453179.1 type VII secretion protein EccCa, partial [uncultured Microbacterium sp.] | diamond | 1035 | 219 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | uncultured Microbacterium sp. | ||
| 26597635 | 26597635 | PRJNA1233317_S_NODE_6581_length_292_cov_32.360515_g6545_i0 | PRJNA1233317 | 6581 | 292 | 32.360515 | 94.4927038 | Microthrixaceae bacterium | 2497627 | Bacteria | Bacteria | 43.1 | 0.044 | NR | MEZ5269981.1 | 2497627 | g6545 | i0 | 48.6 | 0.38013698630137 | 37 | 19 | 38 | 0 | 178 | 288 | 242 | 278 | MEZ5269981.1 enoyl-CoA hydratase-related protein [Microthrixaceae bacterium] | diamond | 111 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Microthrixaceae | Microthrixaceae bacterium | |||
| 26977850 | 26977850 | PRJNA1233317_S_NODE_8322_length_267_cov_12.062500_g8286_i0 | PRJNA1233317 | 8322 | 267 | 12.0625 | 32.206875 | Haloechinothrix halophila | 1069073 | Bacteria | Bacteria | 43.9 | 0.019 | NR | WP_034268929.1 | 1069073 | g8286 | i0 | 42 | 0.561797752808989 | 50 | 25 | 51.7 | 1 | 35 | 172 | 102 | 151 | WP_034268929.1 amidohydrolase [Haloechinothrix halophila] | diamond | 150 | 43.9 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Haloechinothrix | Haloechinothrix halophila | ||
| 27294016 | 27294016 | PRJNA1233317_S_NODE_9183_length_256_cov_3.091371_g9147_i0 | PRJNA1233317 | 9183 | 256 | 3.091371 | 7.91390976 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 43.1 | 0.0305 | NR | MBW3661883.1 | 2900548 | g9147 | i0 | 40.4 | 0.609375 | 52 | 27 | 56.3 | 1 | 255 | 112 | 201 | 252 | MBW3661883.1 DUF222 domain-containing protein [Actinomycetota bacterium] | diamond | 156 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium | ||||||
| 27470848 | 27470848 | PRJNA1233317_S_NODE_5843_length_304_cov_3.648980_g5807_i0 | PRJNA1233317 | 5843 | 304 | 3.64898 | 11.0928992 | Bacillati | 1783272 | Bacteria | Bacteria | 198 | 2.66e-61 | NR | PYC99595.1 | 57043 | g5807 | i0 | 100 | 1.83552631578947 | 93 | 0 | 91.8 | 0 | 280 | 2 | 22 | 114 | PYC99595.1 hypothetical protein B4U78_015940, partial [Microbacterium esteraromaticum] | diamond | 558 | 198 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium esteraromaticum | ||
| 27692044 | 27692044 | PRJNA1233317_S_NODE_9704_length_249_cov_3.784211_g9668_i0 | PRJNA1233317 | 9704 | 249 | 3.784211 | 9.42268539 | Bacillati | 1783272 | Bacteria | Bacteria | 106 | 4.6e-27 | NR | PYC99492.1 | 57043 | g9668 | i0 | 78.3 | 1.66265060240964 | 69 | 15 | 83.1 | 0 | 246 | 40 | 84 | 152 | PYC99492.1 hypothetical protein B4U78_016815, partial [Microbacterium esteraromaticum] | diamond | 414 | 106 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium esteraromaticum | ||
| 28872743 | 28872743 | PRJNA1233317_S_NODE_16568_length_187_cov_3.257812_g16532_i0 | PRJNA1233317 | 16568 | 187 | 3.257812 | 6.09210844 | Streptomyces sp. NPDC | 1931 | Bacteria | Bacteria | 41.6 | 0.0449 | NR | WP_362335506.1 | 3155130 | g16532 | i0 | 39.5 | 0.689839572192513 | 43 | 26 | 69 | 0 | 39 | 167 | 444 | 486 | WP_362335506.1 protein kinase domain-containing protein [Streptomyces sp. NPDC041068] | diamond | 129 | 41.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NPDC041068 | ||
| 29125681 | 29125681 | PRJNA1233317_S_NODE_8029_length_272_cov_0.976526_g7993_i0 | PRJNA1233317 | 8029 | 272 | 0.976526 | 2.65615072 | Streptomyces triticiradicis | 2651189 | Bacteria | Bacteria | 43.1 | 0.037 | NR | WP_151473195.1 | 2651189 | g7993 | i0 | 33.8 | 0.816176470588235 | 74 | 38 | 73.9 | 2 | 70 | 270 | 28 | 97 | WP_151473195.1 M20 family metallopeptidase [Streptomyces triticiradicis] | diamond | 222 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces triticiradicis | ||
| 30009735 | 30009735 | PRJNA1233317_S_NODE_15251_length_196_cov_5.043796_g15215_i0 | PRJNA1233317 | 15251 | 196 | 5.043796 | 9.88584016 | Ornithinimicrobium avium | 2283195 | Bacteria | Bacteria | 85.1 | 6.1e-18 | NR | WP_162802826.1 | 2283195 | g15215 | i0 | 67.2 | 0.979591836734694 | 64 | 21 | 98 | 0 | 4 | 195 | 57 | 120 | WP_162802826.1 Flp pilus assembly protein CpaB [Ornithinimicrobium avium] | diamond | 192 | 85.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Ornithinimicrobiaceae | Ornithinimicrobium | Ornithinimicrobium avium | ||
| 31368586 | 31368586 | PRJNA1233317_S_NODE_9936_length_246_cov_2.935829_g9900_i0 | PRJNA1233317 | 9936 | 246 | 2.935829 | 7.22213934 | Streptomyces roseolus | 67358 | Bacteria | Bacteria | 42.4 | 0.0083 | NR | WP_359530280.1 | 67358 | g9900 | i0 | 45.7 | 0.560975609756098 | 46 | 23 | 56.1 | 1 | 98 | 235 | 29 | 72 | WP_359530280.1 chaplin [Streptomyces roseolus] | diamond | 138 | 42.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces roseolus | ||
| 32114832 | 32114832 | PRJNA1233317_S_NODE_10158_length_244_cov_1.772973_g10122_i0 | PRJNA1233317 | 10158 | 244 | 1.772973 | 4.32605412 | Bacillati | 1783272 | Bacteria | Bacteria | 153 | 3.81e-44 | NR | PYC99595.1 | 57043 | g10122 | i0 | 100 | 1.99180327868852 | 81 | 0 | 99.6 | 0 | 2 | 244 | 153 | 233 | PYC99595.1 hypothetical protein B4U78_015940, partial [Microbacterium esteraromaticum] | diamond | 486 | 153 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium esteraromaticum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;