contig_metadata
9 rows where analysis = "diamond" and bioproject = "PRJNA1228616"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27641658 | 27641658 | PRJNA1228616_S_NODE_3504_length_215_cov_1.244186_g3481_i0 | PRJNA1228616 | 3504 | 215 | 1.244186 | 2.6749999 | Lynx pardinus | 191816 | Chordata | Chordata | 46.6 | 3.82e-4 | NR | VFV35591.1 | 191816 | g3481 | i0 | 48.9 | 1.29767441860465 | 47 | 20 | 60 | 1 | 137 | 9 | 30 | 76 | VFV35591.1 ribosomal protein l17 [Lynx pardinus] | diamond | 279 | 46.6 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Carnivora | Felidae | Lynx | Lynx pardinus | |
| 27893925 | 27893925 | PRJNA1228616_S_NODE_2345_length_251_cov_1.456731_g2322_i0 | PRJNA1228616 | 2345 | 251 | 1.456731 | 3.65639481 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 43.1 | 0.0301 | NR | MEQ9459848.1 | 2026777 | g2322 | i0 | 33.8 | 0.812749003984064 | 68 | 42 | 81.3 | 1 | 245 | 42 | 230 | 294 | MEQ9459848.1 glucosamine-6-phosphate deaminase [Phycisphaeraceae bacterium] | diamond | 204 | 43.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 28083378 | 28083378 | PRJNA1228616_S_NODE_8965_length_150_cov_1.317757_g8942_i0 | PRJNA1228616 | 8965 | 150 | 1.317757 | 1.9766355 | Lactobacillus delbrueckii | 1584 | Bacteria | Bacteria | 70.1 | 2.28e-14 | NR | MBT8837403.1 | 1585 | g8942 | i0 | 60.9 | 5.62 | 46 | 18 | 92 | 0 | 143 | 6 | 19 | 64 | MBT8837403.1 hypothetical protein [Lactobacillus delbrueckii subsp. bulgaricus] | diamond | 843 | 70.1 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus delbrueckii | ||
| 28336045 | 28336045 | PRJNA1228616_S_NODE_6826_length_166_cov_1.016260_g6803_i0 | PRJNA1228616 | 6826 | 166 | 1.01626 | 1.6869916 | Heterobasidion irregulare TC 32-1 | 747525 | Fungi | Fungi | 42.7 | 0.0132 | NR | XP_009549396.1 | 747525 | g6803 | i0 | 61.3 | 0.560240963855422 | 31 | 11 | 56 | 1 | 139 | 47 | 234 | 263 | XP_009549396.1 uncharacterized protein HETIRDRAFT_445859 [Heterobasidion irregulare TC 32-1] | diamond | 93 | 42.7 | 1 | Eukaryota | Opisthokonta | Fungi | Basidiomycota | Agaricomycetes | Russulales | Bondarzewiaceae | Heterobasidion | Heterobasidion irregulare | |
| 29283117 | 29283117 | PRJNA1228616_S_NODE_3449_length_216_cov_2.289017_g3426_i0 | PRJNA1228616 | 3449 | 216 | 2.289017 | 4.94427672 | Weissella cibaria | 137591 | Bacteria | Bacteria | 43.5 | 0.00656 | NR | WP_196777313.1 | 137591 | g3426 | i0 | 58.8 | 0.944444444444444 | 68 | 18 | 93.1 | 4 | 13 | 213 | 21 | 79 | WP_196777313.1 hypothetical protein, partial [Weissella cibaria] | diamond | 204 | 43.5 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Weissella | Weissella cibaria | ||
| 29409489 | 29409489 | PRJNA1228616_S_NODE_1069_length_328_cov_3.424561_g1046_i0 | PRJNA1228616 | 1069 | 328 | 3.424561 | 11.23256008 | Oxyura jamaicensis | 8884 | Chordata | Chordata | 46.6 | 0.00359 | NR | XP_035182290.1 | 8884 | g1046 | i0 | 50.6 | 0.740853658536585 | 81 | 39 | 73.2 | 1 | 81 | 320 | 8 | 88 | XP_035182290.1 homeobox protein EMX1, partial [Oxyura jamaicensis] | diamond | 243 | 46.6 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Anseriformes | Anatidae | Oxyura | Oxyura jamaicensis | |
| 30546691 | 30546691 | PRJNA1228616_S_NODE_2513_length_245_cov_1.707921_g2490_i0 | PRJNA1228616 | 2513 | 245 | 1.707921 | 4.18440645 | Staphylococcus aureus | 1280 | Bacteria | Bacteria | 45.1 | 0.00524 | NR | WP_218587743.1 | 1280 | g2490 | i0 | 59 | 0.955102040816327 | 78 | 26 | 94.3 | 3 | 231 | 1 | 59 | 131 | WP_218587743.1 hypothetical protein, partial [Staphylococcus aureus] | diamond | 234 | 45.1 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 30862608 | 30862608 | PRJNA1228616_S_NODE_7034_length_164_cov_1.438017_g7011_i0 | PRJNA1228616 | 7034 | 164 | 1.438017 | 2.35834788 | Enterococcus faecalis | 1351 | Bacteria | Bacteria | 85.9 | 2.62e-20 | NR | WP_375855466.1 | 1351 | g7011 | i0 | 97.9 | 1.71951219512195 | 48 | 1 | 87.8 | 0 | 163 | 20 | 37 | 84 | WP_375855466.1 hypothetical protein [Enterococcus faecalis] | diamond | 282 | 85.9 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus faecalis | ||
| 31842636 | 31842636 | PRJNA1228616_S_NODE_7977_length_156_cov_2.778761_g7954_i0 | PRJNA1228616 | 7977 | 156 | 2.778761 | 4.33486716 | Ceratitis capitata | 7213 | Arthropoda | Arthropoda | 60.8 | 1.71e-9 | NR | CAD7015487.1 | 7213 | g7954 | i0 | 62.5 | 1.07692307692308 | 56 | 14 | 94.2 | 3 | 6 | 152 | 20 | 75 | CAD7015487.1 unnamed protein product [Ceratitis capitata] | diamond | 168 | 60.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Arthropoda | Insecta | Diptera | Tephritidae | Ceratitis | Ceratitis capitata |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;